myRT

myRT report for GCA_009938355.1_ASM993835v1

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Seq: RPBD01000001.1 Cronobacter sakazakii strain HA03 Scaffold1, whole genome shotgun sequence (1310079 bp)
Overview 1 RT 1: 212796-217416 bp Neighborhood of RT #1 [212796, 217499] SLATT_5 RVT-UG17 PRK09692 FocA Feature: gene Location: 212796-212993 bp Feature: gene Location: 213181-213747 bp Ori: NCH12746.1 Feature: domain Description: SLATT_5 Location: 213199-213727 bp Feature: domain Description: SLATT_5 Location: 21 31 99-21 3727 bp Feature: gene Location: 213744-215078 bp Ori: NCH12747.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 213972-214575 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 21 3972-21 4575 bp Feature: gene Location: 215068-216237 bp Ori: NCH12748.1 Feature: domain Description: PRK09692 Location: 215077-216226 bp Feature: domain Description: PRK09692 Location: 21 5077-21 6226 bp Feature: gene Location: 216549-217499 bp Ori: NCH12749.1 Feature: domain Description: FocA Location: 216642-217416 bp Feature: domain Description: FocA Location: 21 6642-21 741 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, PRK09692 (Integrase; provisional), FocA (COG2116)

Seq: RPBD01000004.1 Cronobacter sakazakii strain HA03 Scaffold4, whole genome shotgun sequence (398173 bp)
Overview 1 RT 1: 83638-87449 bp Neighborhood of RT #1 [83638, 87449] RVT-Retrons Feature: gene Location: 83638-84060 bp Feature: gene Location: 84640-84843 bp Feature: gene Location: 84862-85821 bp Ori: NCH15260.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85039-85564 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85039-85564 bp Feature: gene Location: 86137-86523 bp Feature: gene Location: 86814-87449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons