myRT

myRT report for GCA_009939155.1_ASM993915v1

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Seq: JAACJB010000004.1 Pseudomonas aeruginosa strain NICED-PA-01 NODE_4_length_490709_cov_20.0319, whole genome shotgun sequence (490709 bp)
Overview 1 RT 1: 75863-83100 bp Neighborhood of RT #1 [75863, 83162] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 75863-76369 bp Feature: domain Description: HxlR Location: 75887-76205 bp Feature: domain Description: HxlR Location: 75887-76205 bp Feature: gene Location: 76478-77746 bp Feature: domain Description: PRK06333 Location: 76484-77741 bp Feature: domain Description: PRK06333 Location: 76484-77741 bp Feature: gene Location: 78453-79592 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 78495-79281 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 78495-79281 bp Feature: gene Location: 79764-80600 bp Feature: domain Description: YHI9 Location: 79776-80592 bp Feature: domain Description: YHI9 Location: 79776-80592 bp Feature: gene Location: 80760-83162 bp Feature: domain Description: STN Location: 80880-81033 bp Feature: domain Description: STN Location: 80880-81 033 bp Feature: domain Description: TonB-siderophor Location: 81141-83100 bp Feature: domain Description: TonB-siderophor Location: 81 1 41 -831 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)

Seq: JAACJB010000059.1 Pseudomonas aeruginosa strain NICED-PA-01 NODE_59_length_2991_cov_57.4452, whole genome shotgun sequence (2991 bp)
Overview 1 RT 1: 68-2767 bp Neighborhood of RT #1 [68, 2767] RVT_N RVT-GII YkfC HNH Feature: gene Location: 68-1780 bp Feature: domain Description: RVT_N Location: 125-368 bp Feature: domain Description: RVT_N Location: 12 5-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-1046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-1046 bp Feature: domain Description: YkfC Location: 1259-1409 bp Feature: domain Description: YkfC Location: 12 59-1409 bp Feature: domain Description: HNH Note: nucleases Location: 1586-1724 bp Feature: domain Description: HNH Note: nucleases Location: 1586-172 4 bp Feature: gene Location: 2202-2471 bp Feature: gene Location: 2621-2767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844)