myRT

myRT report for GCA_009991645.1_ASM999164v1

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Seq: VTGJ01000034.1 Vibrio parahaemolyticus strain 001-15 contig_34_consensus, whole genome shotgun sequence (307642 bp)
Overview 1 RT 1: 124097-129177 bp Neighborhood of RT #1 [124097, 129275] Mrr_cat zf-C4_Topoisom RVT-Retrons HipA_So_like couple_hipB Feature: gene Location: 124097-124912 bp Feature: domain Description: Mrr_cat Location: 124397-124727 bp Feature: domain Description: Mrr_cat Location: 1 24397-1 24727 bp Feature: domain Description: zf-C4_Topoisom Location: 124796-124904 bp Feature: domain Description: zf-C4_Topoisom Location: 1 24796-1 24904 bp Feature: gene Location: 125360-126343 bp Feature: gene Location: 126466-127449 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126631-127186 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 26631 -1 271 86 bp Feature: gene Location: 127541-128947 bp Feature: domain Description: HipA_So_like Location: 127622-128903 bp Feature: domain Description: HipA_So_like Location: 1 27622-1 28903 bp Feature: gene Location: 128940-129275 bp Feature: domain Description: couple_hipB Location: 129009-129177 bp Feature: domain Description: couple_hipB Location: 1 29009-1 291 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), zf-C4_Topoisom (pfam01396), RVT-Retrons, HipA_So_like (cd17809), couple_hipB (TIGR03070)

Seq: VTGJ01000009.1 Vibrio parahaemolyticus strain 001-15 contig_9_consensus, whole genome shotgun sequence (525888 bp)
Overview 1 RT 1: 136-7445 bp Neighborhood of RT #1 [136, 7445] HsdR RVT-UG1 Feature: gene Location: 136-3105 bp Feature: domain Description: HsdR Location: 193-3022 bp Feature: domain Description: HsdR Location: 193-302 2 bp Feature: gene Location: 3175-5274 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3862-4390 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3862 -4390 bp Feature: gene Location: 5275-6942 bp Feature: gene Location: 7296-7445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdR (COG4096), RVT-UG1