myRT

myRT report for GCA_009992845.1_ASM999284v1

Download annotations/find similar RTs

Seq: JAACUN010000132.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_11610, whole genome shotgun sequence (5167 bp)
Overview 1 RT 1: 3-4834 bp Neighborhood of RT #1 [3, 5028] ARS_like RT_G2_intron RVT-DGRs Feature: gene Location: 3-1625 bp Feature: domain Description: ARS_like Location: 6-1167 bp Feature: domain Description: ARS_like Location: 6-1 1 67 bp Feature: gene Location: 1662-4115 bp Feature: gene Location: 4162-5028 bp Feature: domain Description: RT_G2_intron Location: 4168-4222 bp Feature: domain Description: RT_G2_intron Location: 41 68-4222 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4318-4834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 431 8-4834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_G2_intron (cd01651), RVT-DGRs

Seq: JAACUN010000294.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_18155, whole genome shotgun sequence (3549 bp)
Overview 1 RT 1: 335-3547 bp Neighborhood of RT #1 [335, 3547] DUF1080 DUF1080 RVT-DGRs RVT-DGRs Avd_like Feature: gene Location: 335-1012 bp Feature: domain Description: DUF1080 Location: 434-998 bp Feature: domain Description: DUF1080 Location: 434-998 bp Feature: gene Location: 1126-1827 bp Feature: domain Description: DUF1080 Location: 1243-1810 bp Feature: domain Description: DUF1080 Location: 12 43-1810 bp Feature: gene Location: 2010-2786 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2220-2340 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 2 2 0-2 340 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2433-2535 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 433-2 535 bp Feature: gene Location: 2876-3310 bp Feature: domain Description: Avd_like Location: 2963-3266 bp Feature: domain Description: Avd_like Location: 2 963-32 66 bp Feature: gene Location: 3413-3547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1080 (pfam06439), RVT-DGRs, Avd_like (cd16376)

Seq: JAACUN010000553.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_2017, whole genome shotgun sequence (14845 bp)
Overview 1 RT 1: 235-5056 bp Neighborhood of RT #1 [235, 5097] Avd_like Avd_like RVT-DGRs RVT-DGRs NT_KNTase_like DUF4058 Feature: gene Location: 235-654 bp Feature: domain Description: Avd_like Location: 268-574 bp Feature: domain Description: Avd_like Location: 268-574 bp Feature: gene Location: 709-1128 bp Feature: domain Description: Avd_like Location: 742-1048 bp Feature: domain Description: Avd_like Location: 742-1048 bp Feature: gene Location: 1793-2989 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2018-2141 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2018-2141 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2240-2756 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2240-2756 bp Feature: gene Location: 3504-4016 bp Feature: domain Description: NT_KNTase_like Location: 3555-3705 bp Feature: domain Description: NT_KNTase_like Location: 3 555-3 705 bp Feature: gene Location: 4300-5097 bp Feature: domain Description: DUF4058 Location: 4303-5056 bp Feature: domain Description: DUF4058 Location: 43 03 -5056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF4058 (pfam13267)

Seq: JAACUN010000779.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_37176, whole genome shotgun sequence (3423 bp)
Overview 1 RT 1: 686-3395 bp Neighborhood of RT #1 [686, 3421] YfmG Avd_like RVT-DGRs Feature: gene Location: 686-1885 bp Feature: domain Description: YfmG Location: 992-1865 bp Feature: domain Description: YfmG Location: 992-1865 bp Feature: gene Location: 1962-2381 bp Feature: domain Description: Avd_like Location: 1989-2295 bp Feature: domain Description: Avd_like Location: 1989-2295 bp Feature: gene Location: 2858-3421 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3065-3395 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3065-3395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YfmG (COG1262)

Seq: JAACUN010000249.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_3914, whole genome shotgun sequence (13135 bp)
Overview 1 RT 1: 11419-12929 bp Neighborhood of RT #1 [11419, 13132] YiaG RVT-DGRs Feature: gene Location: 11419-11742 bp Feature: domain Description: YiaG Location: 11530-11713 bp Feature: domain Description: YiaG Location: 115 30-11713 bp Feature: gene Location: 11705-12079 bp Feature: gene Location: 12575-13132 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12593-12929 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125 93-12929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaG (COG2944), RVT-DGRs

Seq: JAACUN010000848.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_55955, whole genome shotgun sequence (3046 bp)
Overview 1 RT 1: 1-2406 bp Neighborhood of RT #1 [1, 2939] RVT-DGRs CsgG DUF4384 COG3018 Feature: gene Location: 1-327 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25-139 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25-139 bp Feature: gene Location: 469-1557 bp Feature: domain Description: CsgG Location: 700-877 bp Feature: domain Description: CsgG Location: 700-877 bp Feature: domain Description: DUF4384 Location: 1120-1357 bp Feature: domain Description: DUF4384 Location: 1120-1357 bp Feature: gene Location: 1743-2939 bp Feature: domain Description: COG3018 Location: 2124-2406 bp Feature: domain Description: COG3018 Location: 2124-2406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, COG3018 (Uncharacterized protein ), CsgG (pfam03783), DUF4384 (pfam14326)

Seq: JAACUN010000851.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_57223, whole genome shotgun sequence (1819 bp)
Overview 1 RT 1: 1-973 bp Neighborhood of RT #1 [1, 1416] RVT-DGRs RVT-DGRs Feature: gene Location: 1-1416 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 244-367 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 244-367 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 454-973 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 454-97 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAACUN010000368.1 Armatimonadetes bacterium isolate CG_2015-24_66_21 CG_2015-24_curated_scaffold_6615, whole genome shotgun sequence (6937 bp)
Overview 1 RT 1: 2-5959 bp Neighborhood of RT #1 [2, 6033] nirV Hrd RVT-DGRs DUF4091 COG2865 Feature: gene Location: 2-292 bp Feature: domain Description: nirV Location: 17-272 bp Feature: domain Description: nirV Location: 17-272 bp Feature: gene Location: 459-938 bp Feature: domain Description: Hrd Location: 696-903 bp Feature: domain Description: Hrd Location: 696-903 bp Feature: gene Location: 999-1358 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1002-1152 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1002-1152 bp Feature: gene Location: 2157-4646 bp Feature: domain Description: DUF4091 Location: 4182-4392 bp Feature: domain Description: DUF4091 Location: 418 2-4392 bp Feature: gene Location: 4867-6033 bp Feature: domain Description: COG2865 Location: 4897-5959 bp Feature: domain Description: COG28 65 Location: 48 97-5959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4091 (pfam13320), nirV (LOAD_nirV), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-DGRs