myRT

myRT report for GCA_009993295.1_ASM999329v1

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Seq: JAACTU010000041.1 Nitrospirae bacterium isolate CG_2015-19_43_20 CG_2015-19_curated_scaffold_210, whole genome shotgun sequence (42403 bp)
Overview 1 RT 1: 37477-40874 bp Neighborhood of RT #1 [37477, 40903] dcd PRK00230 RVT-GII KOG4768 DUF2442 Feature: gene Location: 37477-38025 bp Feature: domain Description: dcd Location: 37480-38020 bp Feature: domain Description: dcd Location: 37480-38020 bp Feature: gene Location: 38045-38779 bp Feature: domain Description: PRK00230 Location: 38075-38768 bp Feature: domain Description: PRK00230 Location: 38075-38768 bp Feature: gene Location: 39017-40060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39302-39605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39302-39605 bp Feature: domain Description: KOG4768 Location: 39797-39884 bp Feature: domain Description: KOG4768 Location: 39797-39884 bp Feature: gene Location: 40343-40525 bp Feature: gene Location: 40631-40903 bp Feature: domain Description: DUF2442 Location: 40667-40874 bp Feature: domain Description: DUF2442 Location: 40667-40874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dcd (PRK00416), PRK00230 (orotidine-5'-phosphate decarboxylase), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), DUF2442 (pfam10387)

Seq: JAACTU010000056.1 Nitrospirae bacterium isolate CG_2015-19_43_20 CG_2015-19_curated_scaffold_591, whole genome shotgun sequence (50470 bp)
Overview 1 RT 1: 16297-23931 bp Neighborhood of RT #1 [16297, 23939] DUF433 COG0610 RVT-UG9 YtxH HflB Feature: gene Location: 16297-16524 bp Feature: domain Description: DUF433 Location: 16318-16483 bp Feature: domain Description: DUF433 Location: 16318-16483 bp Feature: gene Location: 16571-19456 bp Feature: domain Description: COG0610 Location: 16589-19394 bp Feature: domain Description: COG0610 Location: 16589-19394 bp Feature: gene Location: 19710-21308 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 19911-20517 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 19911-2 0517 bp Feature: gene Location: 21535-21882 bp Feature: domain Description: YtxH Location: 21574-21781 bp Feature: domain Description: YtxH Location: 2 1574-2 1781 bp Feature: gene Location: 22041-23939 bp Feature: domain Description: HflB Location: 22134-23931 bp Feature: domain Description: HflB Location: 2 2 134-2 3931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF433 (pfam04255), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG9, YtxH (pfam12732), HflB (COG0465)