myRT

myRT report for GCA_009993545.1_ASM999354v1

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Seq: JAACTD010000081.1 Cyanobacteria bacterium CG_2015-16_32_12 CG_2015-16_curated_scaffold_1218, whole genome shotgun sequence (23623 bp)
Overview 1 RT 1: 4561-13489 bp Neighborhood of RT #1 [4561, 13503] DUF45 AE_Prim_S_like RVT-Retrons COG4639 WYL Feature: gene Location: 4561-5310 bp Feature: domain Description: DUF45 Location: 4654-5290 bp Feature: domain Description: DUF45 Location: 4654-5290 bp Feature: gene Location: 5935-8301 bp Feature: domain Description: AE_Prim_S_like Location: 6121-6457 bp Feature: domain Description: AE_Prim_S_like Location: 61 21 -6457 bp Feature: gene Location: 9303-10433 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9519-10149 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 951 9-1 01 49 bp Feature: gene Location: 10465-11442 bp Feature: gene Location: 11452-13503 bp Feature: domain Description: COG4639 Location: 11473-11896 bp Feature: domain Description: COG4639 Location: 1 1 473-1 1 896 bp Feature: domain Description: WYL Location: 12799-13489 bp Feature: domain Description: WYL Location: 1 2799-1 3489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), AE_Prim_S_like (cl01287), RVT-Retrons

Seq: JAACTD010000094.1 Cyanobacteria bacterium CG_2015-16_32_12 CG_2015-16_curated_scaffold_1641, whole genome shotgun sequence (20392 bp)
Overview 1 RT 1: 1-3497 bp Neighborhood of RT #1 [1, 3497] InsQ RVT_N RVT-GII HNHc Feature: gene Location: 1-1032 bp Feature: domain Description: InsQ Location: 19-931 bp Feature: domain Description: InsQ Location: 19-931 bp Feature: gene Location: 1682-2446 bp Feature: RT Description: RVT_N Location: 1733-1976 bp Feature: RT Description: RVT_N Location: 1733-1976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2018-2444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 018-2 444 bp Feature: gene Location: 2506-2883 bp Feature: domain Description: HNHc Note: nucleases Location: 2686-2860 bp Feature: domain Description: HNHc Note: nucleases Location: 2 686-2 860 bp Feature: gene Location: 3117-3497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, HNHc (smart00507)