myRT

myRT report for GCA_009993925.1_ASM999392v1

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Seq: JAACSJ010000205.1 Cyanobacteria bacterium CG_2015-09_32_10 CG_2015-09_curated_scaffold_1404, whole genome shotgun sequence (23621 bp)
Overview 1 RT 1: 4621-13549 bp Neighborhood of RT #1 [4621, 13563] DUF45 AE_Prim_S_like RVT-Retrons COG4639 WYL Feature: gene Location: 4621-5370 bp Feature: domain Description: DUF45 Location: 4714-5350 bp Feature: domain Description: DUF45 Location: 471 4-5350 bp Feature: gene Location: 5995-8361 bp Feature: domain Description: AE_Prim_S_like Location: 6181-6517 bp Feature: domain Description: AE_Prim_S_like Location: 61 81 -651 7 bp Feature: gene Location: 9363-10493 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9579-10209 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9579-1 0209 bp Feature: gene Location: 10525-11502 bp Feature: gene Location: 11512-13563 bp Feature: domain Description: COG4639 Location: 11533-11956 bp Feature: domain Description: COG4639 Location: 1 1 533-1 1 956 bp Feature: domain Description: WYL Location: 12859-13549 bp Feature: domain Description: WYL Location: 1 2859-1 3549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), AE_Prim_S_like (cl01287), RVT-Retrons

Seq: JAACSJ010000221.1 Cyanobacteria bacterium CG_2015-09_32_10 CG_2015-09_curated_scaffold_1953, whole genome shotgun sequence (19468 bp)
Overview 1 RT 1: 2-3528 bp Neighborhood of RT #1 [2, 3528] InsQ RVT_N RVT-GII HNHc Feature: gene Location: 2-1063 bp Feature: domain Description: InsQ Location: 23-962 bp Feature: domain Description: InsQ Location: 2 3-962 bp Feature: gene Location: 1713-2477 bp Feature: RT Description: RVT_N Location: 1764-2007 bp Feature: RT Description: RVT_N Location: 1764-2 007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049-2475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 049-2 475 bp Feature: gene Location: 2537-2914 bp Feature: domain Description: HNHc Note: nucleases Location: 2717-2891 bp Feature: domain Description: HNHc Note: nucleases Location: 2 717-2 891 bp Feature: gene Location: 3148-3528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, InsQ (COG0675), HNHc (smart00507)