myRT

myRT report for GCA_009994695.1_ASM999469v1

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Seq: JAACQX010000116.1 Cyanobacteria bacterium CG_2015-04_32_10 CG_2015-04_curated_scaffold_1338, whole genome shotgun sequence (26309 bp)
Overview 1 RT 1: 2-3552 bp Neighborhood of RT #1 [2, 3552] InsQ RVT_N RVT-GII HNHc Feature: gene Location: 2-1087 bp Feature: domain Description: InsQ Location: 47-986 bp Feature: domain Description: InsQ Location: 47-986 bp Feature: gene Location: 1737-2501 bp Feature: RT Description: RVT_N Location: 1788-2031 bp Feature: RT Description: RVT_N Location: 1 788-2031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2073-2499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2073-2499 bp Feature: gene Location: 2561-2938 bp Feature: domain Description: HNHc Note: nucleases Location: 2741-2915 bp Feature: domain Description: HNHc Note: nucleases Location: 2741 -291 5 bp Feature: gene Location: 3172-3552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, InsQ (COG0675), HNHc (smart00507)

Seq: JAACQX010000121.1 Cyanobacteria bacterium CG_2015-04_32_10 CG_2015-04_curated_scaffold_1648, whole genome shotgun sequence (23652 bp)
Overview 1 RT 1: 4599-13527 bp Neighborhood of RT #1 [4599, 13541] DUF45 AE_Prim_S_like RVT-Retrons COG4639 WYL Feature: gene Location: 4599-5348 bp Feature: domain Description: DUF45 Location: 4692-5328 bp Feature: domain Description: DUF45 Location: 4692 -532 8 bp Feature: gene Location: 5973-8339 bp Feature: domain Description: AE_Prim_S_like Location: 6159-6495 bp Feature: domain Description: AE_Prim_S_like Location: 6159-6495 bp Feature: gene Location: 9341-10471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9557-10187 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9557-10187 bp Feature: gene Location: 10503-11480 bp Feature: gene Location: 11490-13541 bp Feature: domain Description: COG4639 Location: 11511-11934 bp Feature: domain Description: COG4639 Location: 11511-11934 bp Feature: domain Description: WYL Location: 12837-13527 bp Feature: domain Description: WYL Location: 12 837-1352 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), AE_Prim_S_like (cl01287), RVT-Retrons