myRT

myRT report for GCA_009995425.1_ASM999542v1

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Seq: JAACPN010000067.1 Legionella sp. isolate CG_2015-02_43_12 CG_2015-02_curated_scaffold_4943, whole genome shotgun sequence (12093 bp)
Overview 1 RT 1: 7542-11831 bp Neighborhood of RT #1 [7542, 11890] DUF1566 DUF1566 RVT-DGRs COG2865 Feature: gene Location: 7542-8555 bp Feature: domain Description: DUF1566 Location: 8175-8541 bp Feature: domain Description: DUF1 566 Location: 81 75-8541 bp Feature: gene Location: 8619-8873 bp Feature: domain Description: DUF1566 Location: 8703-8832 bp Feature: domain Description: DUF1 566 Location: 8703-8832 bp Feature: gene Location: 8905-10086 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9100-9799 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 91 00-9799 bp Feature: gene Location: 10118-10375 bp Feature: gene Location: 10436-11890 bp Feature: domain Description: COG2865 Location: 10442-11831 bp Feature: domain Description: COG2865 Location: 1 0442-1 1 831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: JAACPN010000038.1 Legionella sp. isolate CG_2015-02_43_12 CG_2015-02_curated_scaffold_5361, whole genome shotgun sequence (11577 bp)
Overview 1 RT 1: 8434-11576 bp Neighborhood of RT #1 [8434, 11576] HAD_PGPase RVT-GII GIIM Legionella_OMP Feature: gene Location: 8434-8901 bp Feature: domain Description: HAD_PGPase Location: 8449-8872 bp Feature: domain Description: HAD_PGPase Location: 8449-8872 bp Feature: gene Location: 8907-9035 bp Feature: gene Location: 9408-10637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9606-10263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9606-102 63 bp Feature: domain Description: GIIM Note: maturase Location: 10344-10563 bp Feature: domain Description: GIIM Note: maturase Location: 10344-10563 bp Feature: gene Location: 10967-11248 bp Feature: domain Description: Legionella_OMP Location: 11105-11174 bp Feature: domain Description: Legionella_OMP Location: 11105-11174 bp Feature: gene Location: 11427-11576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_PGPase (cd16421), RVT-GII, GIIM (pfam08388), Legionella_OMP (pfam05150)

Seq: JAACPN010000041.1 Legionella sp. isolate CG_2015-02_43_12 CG_2015-02_curated_scaffold_5592, whole genome shotgun sequence (13245 bp)
Overview 1 RT 1: 223-2788 bp Neighborhood of RT #1 [223, 2808] RVT-GII GIIM MreD Feature: gene Location: 223-1473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427-1084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427-1084 bp Feature: domain Description: GIIM Note: maturase Location: 1165-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1165-13 81 bp Feature: gene Location: 2170-2304 bp Feature: gene Location: 2317-2808 bp Feature: domain Description: MreD Location: 2338-2788 bp Feature: domain Description: MreD Location: 23 3 8-2788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MreD (pfam04093)

Seq: JAACPN010000044.1 Legionella sp. isolate CG_2015-02_43_12 CG_2015-02_curated_scaffold_5885, whole genome shotgun sequence (10975 bp)
Overview 1 RT 1: 7171-10459 bp Neighborhood of RT #1 [7171, 10728] asn_synth_AEB RVT-UG4 Feature: gene Location: 7171-9012 bp Feature: domain Description: asn_synth_AEB Location: 7381-8767 bp Feature: domain Description: asn_synth_AEB Location: 7381-8767 bp Feature: gene Location: 9018-9230 bp Feature: gene Location: 9661-10728 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10012-10459 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10012-104 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT asn_synth_AEB (TIGR01536), RVT-UG4

Seq: JAACPN010000021.1 Legionella sp. isolate CG_2015-02_43_12 CG_2015-02_curated_scaffold_880, whole genome shotgun sequence (34383 bp)
Overview 1 RT 1: 48-5635 bp Neighborhood of RT #1 [48, 5643] RVT_N RVT-GII GIIM Tra8 M3A_DCP Feature: gene Location: 48-221 bp Feature: gene Location: 698-2200 bp Feature: domain Description: RVT_N Location: 752-995 bp Feature: domain Description: RVT_N Location: 75 2-995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1040-1664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1040-1664 bp Feature: domain Description: GIIM Note: maturase Location: 1718-1952 bp Feature: domain Description: GIIM Note: maturase Location: 1718-195 2 bp Feature: gene Location: 2219-3265 bp Feature: domain Description: Tra8 Location: 2318-3236 bp Feature: domain Description: Tra8 Location: 2318-3236 bp Feature: gene Location: 3538-5643 bp Feature: domain Description: M3A_DCP Location: 3673-5635 bp Feature: domain Description: M3A_DCP Location: 3673-5 635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra8 (COG2826), M3A_DCP (cd06456)