myRT

myRT report for GCA_009995505.1_ASM999550v1

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Seq: JAACPM010000196.1 Cyanobacteria bacterium CG_2015-02_32_10 CG_2015-02_curated_scaffold_1520, whole genome shotgun sequence (23639 bp)
Overview 1 RT 1: 4600-13528 bp Neighborhood of RT #1 [4600, 13542] DUF45 AE_Prim_S_like RVT-Retrons COG4639 WYL Feature: gene Location: 4600-5349 bp Feature: domain Description: DUF45 Location: 4693-5329 bp Feature: domain Description: DUF45 Location: 4693-5329 bp Feature: gene Location: 5974-8340 bp Feature: domain Description: AE_Prim_S_like Location: 6160-6496 bp Feature: domain Description: AE_Prim_S_like Location: 61 60-6496 bp Feature: gene Location: 9342-10472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9558-10188 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9558-1 01 88 bp Feature: gene Location: 10504-11481 bp Feature: gene Location: 11491-13542 bp Feature: domain Description: COG4639 Location: 11512-11935 bp Feature: domain Description: COG4639 Location: 1 1 51 2-1 1 935 bp Feature: domain Description: WYL Location: 12838-13528 bp Feature: domain Description: WYL Location: 1 2838-1 3528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), AE_Prim_S_like (cl01287), RVT-Retrons

Seq: JAACPM010000210.1 Cyanobacteria bacterium CG_2015-02_32_10 CG_2015-02_curated_scaffold_1953, whole genome shotgun sequence (24065 bp)
Overview 1 RT 1: 1-3536 bp Neighborhood of RT #1 [1, 3536] InsQ RVT_N RVT-GII HNHc Feature: gene Location: 1-1071 bp Feature: domain Description: InsQ Location: 31-970 bp Feature: domain Description: InsQ Location: 31-970 bp Feature: gene Location: 1721-2485 bp Feature: RT Description: RVT_N Location: 1772-2015 bp Feature: RT Description: RVT_N Location: 1772 -2 015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2057-2483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 057-2 483 bp Feature: gene Location: 2545-2922 bp Feature: domain Description: HNHc Note: nucleases Location: 2725-2899 bp Feature: domain Description: HNHc Note: nucleases Location: 2 72 5-2 899 bp Feature: gene Location: 3156-3536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, HNHc (smart00507)