myRT

myRT report for GCA_009996045.1_ASM999604v1

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Seq: JAADAZ010000042.1 Microcystis aeruginosa L211-101 Ga0188005_10184, whole genome shotgun sequence (31487 bp)
Overview 1 RT 1: 283-3771 bp Neighborhood of RT #1 [283, 3771] DUF5615 DUF433 RVT_N RVT-GII GIIM McrA Feature: gene Location: 283-675 bp Feature: domain Description: DUF5615 Location: 379-481 bp Feature: domain Description: DUF561 5 Location: 379-481 bp Feature: gene Location: 672-1049 bp Feature: domain Description: DUF433 Location: 729-852 bp Feature: domain Description: DUF433 Location: 729-852 bp Feature: gene Location: 1408-2913 bp Feature: domain Description: RVT_N Location: 1438-1678 bp Feature: domain Description: RVT_N Location: 1 438-1 678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1735-2329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 735-2329 bp Feature: domain Description: GIIM Note: maturase Location: 2386-2578 bp Feature: domain Description: GIIM Note: maturase Location: 2386-2578 bp Feature: domain Description: McrA Location: 2599-2884 bp Feature: domain Description: McrA Location: 2599-2884 bp Feature: gene Location: 3045-3176 bp Feature: gene Location: 3616-3771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5615 (pfam18480), DUF433 (pfam04255), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAADAZ010000170.1 Microcystis aeruginosa L211-101 Ga0188005_10521, whole genome shotgun sequence (24463 bp)
Overview 1 RT 1: 18595-21843 bp Neighborhood of RT #1 [18595, 21935] RVT-UG14 HTH_3 Feature: gene Location: 18595-18804 bp Feature: gene Location: 18945-19103 bp Feature: gene Location: 19412-20917 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 19826-20306 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 1982 6-2 0306 bp Feature: gene Location: 21245-21430 bp Feature: gene Location: 21594-21935 bp Feature: domain Description: HTH_3 Location: 21735-21843 bp Feature: domain Description: HTH_3 Location: 2 1735-2 1843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, HTH_3 (pfam01381)

Seq: JAADAZ010000383.1 Microcystis aeruginosa L211-101 Ga0188005_11969, whole genome shotgun sequence (1948 bp)
Overview 1 RT 1: 47-1921 bp Neighborhood of RT #1 [47, 1947] RVT_N RVT-GII HTH_23 HTH_33 DDE_3 Feature: gene Location: 47-766 bp Feature: domain Description: RVT_N Location: 50-191 bp Feature: domain Description: RVT_N Location: 50-191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236-623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 6-623 bp Feature: gene Location: 1190-1720 bp Feature: domain Description: HTH_23 Location: 1199-1265 bp Feature: domain Description: HTH_23 Location: 1199-1265 bp Feature: domain Description: HTH_33 Location: 1412-1592 bp Feature: domain Description: HTH_3 3 Location: 1412-1592 bp Feature: gene Location: 1768-1947 bp Feature: domain Description: DDE_3 Location: 1780-1921 bp Feature: domain Description: DDE_3 Location: 1780-1921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358)