myRT

myRT report for GCA_009996185.1_ASM999618v1

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Seq: JAADAT010000007.1 Microcystis aeruginosa K13-05 Ga0188027_100286, whole genome shotgun sequence (70482 bp)
Overview 1 RT 1: 54815-58880 bp Neighborhood of RT #1 [54815, 59242] DUF2283 RVT_N RVT-GII GIIM HNHc NdhS HAS-barrel Feature: gene Location: 54815-55096 bp Feature: gene Location: 55083-55307 bp Feature: domain Description: DUF2283 Location: 55098-55242 bp Feature: domain Description: DUF2283 Location: 55098-55242 bp Feature: gene Location: 56423-58270 bp Feature: domain Description: RVT_N Location: 56489-56732 bp Feature: domain Description: RVT_N Location: 56489-56732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56777-57446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56777-57446 bp Feature: domain Description: GIIM Note: maturase Location: 57551-57776 bp Feature: domain Description: GIIM Note: maturase Location: 57551 -57776 bp Feature: domain Description: HNHc Note: nucleases Location: 57998-58142 bp Feature: domain Description: HNHc Note: nucleases Location: 57998-581 42 bp Feature: gene Location: 58371-58565 bp Feature: domain Description: NdhS Location: 58377-58530 bp Feature: domain Description: NdhS Location: 58377-58530 bp Feature: gene Location: 58568-59242 bp Feature: domain Description: HAS-barrel Location: 58622-58880 bp Feature: domain Description: HAS-barrel Location: 58622-58880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2283 (pfam10049), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), NdhS (pfam11623), HAS-barrel (pfam09378)

Seq: JAADAT010000070.1 Microcystis aeruginosa K13-05 Ga0188027_100655, whole genome shotgun sequence (14712 bp)
Overview 1 RT 1: 138-4004 bp Neighborhood of RT #1 [138, 4012] RVT-GII RVT-GII GIIM McrA NlpD NlpD Feature: gene Location: 138-434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141-432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141-432 bp Feature: gene Location: 480-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-738 bp Feature: domain Description: GIIM Note: maturase Location: 837-1065 bp Feature: domain Description: GIIM Note: maturase Location: 837-1065 bp Feature: domain Description: McrA Location: 1176-1443 bp Feature: domain Description: McrA Location: 1176-1443 bp Feature: gene Location: 1852-1995 bp Feature: gene Location: 2159-4012 bp Feature: domain Description: NlpD Location: 2462-2735 bp Feature: domain Description: NlpD Location: 2 462 -2 735 bp Feature: domain Description: NlpD Location: 3032-4004 bp Feature: domain Description: NlpD Location: 3032 -4004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), NlpD (COG0739)

Seq: JAADAT010000296.1 Microcystis aeruginosa K13-05 Ga0188027_101952, whole genome shotgun sequence (6479 bp)
Overview 1 RT 1: 4168-6083 bp Neighborhood of RT #1 [4168, 6247] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Feature: gene Location: 4168-4347 bp Feature: domain Description: Cas2_I_II_III Location: 4174-4312 bp Feature: domain Description: Cas2_I_II_III Location: 4174-43 12 bp Feature: gene Location: 4443-5549 bp Feature: domain Description: Cas1_I-II-III Location: 4554-5511 bp Feature: domain Description: Cas1_I-II-III Location: 4554-5511 bp Feature: gene Location: 5552-6247 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5558-6083 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5558-6083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR