myRT

myRT report for GCA_009996305.1_ASM999630v1

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Seq: JAADAO010000002.1 Microcystis aeruginosa G13-07 Ga0188009_100010, whole genome shotgun sequence (43412 bp)
Overview 1 RT 1: 17269-23854 bp Neighborhood of RT #1 [17269, 24084] COP23 STKc_PknB_like RVT-GII GIIM McrA RVT_N RVT-GII SMC_prok_B Feature: gene Location: 17269-17856 bp Feature: domain Description: COP23 Location: 17365-17725 bp Feature: domain Description: COP23 Location: 1 7365-1 7725 bp Feature: gene Location: 17877-19565 bp Feature: domain Description: STKc_PknB_like Location: 17907-18669 bp Feature: domain Description: STKc_PknB_like Location: 1 7907-1 8669 bp Feature: gene Location: 19762-20763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19768-19939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9768-1 9939 bp Feature: domain Description: GIIM Note: maturase Location: 20044-20257 bp Feature: domain Description: GIIM Note: maturase Location: 20044-20257 bp Feature: domain Description: McrA Location: 20380-20653 bp Feature: domain Description: McrA Location: 20380-20653 bp Feature: gene Location: 20781-21611 bp Feature: domain Description: RVT_N Location: 20847-21090 bp Feature: domain Description: RVT_N Location: 20847-21 090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21135-21582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 35-21 582 bp Feature: gene Location: 21695-22021 bp Feature: gene Location: 23188-24084 bp Feature: domain Description: SMC_prok_B Location: 23239-23854 bp Feature: domain Description: SMC_prok_B Location: 23239-23854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COP23 (pfam14218), STKc_PknB_like (cd14014), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), SMC_prok_B (TIGR02168)

Seq: JAADAO010000246.1 Microcystis aeruginosa G13-07 Ga0188009_100555, whole genome shotgun sequence (9084 bp)
Overview 1 RT 1: 3402-6984 bp Neighborhood of RT #1 [3402, 6984] YfmG RVT-DGRs PIN_2 Feature: gene Location: 3402-3743 bp Feature: gene Location: 4010-4876 bp Feature: domain Description: YfmG Location: 4085-4871 bp Feature: domain Description: YfmG Location: 4085-4871 bp Feature: gene Location: 5194-6255 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5407-6049 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5407-6049 bp Feature: gene Location: 6335-6601 bp Feature: domain Description: PIN_2 Location: 6371-6593 bp Feature: domain Description: PIN_2 Location: 6371-6593 bp Feature: gene Location: 6745-6984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, PIN_2 (pfam10130)

Seq: JAADAO010000540.1 Microcystis aeruginosa G13-07 Ga0188009_102037, whole genome shotgun sequence (3270 bp)
Overview 1 RT 1: 185-3015 bp Neighborhood of RT #1 [185, 3041] RVT-UG9 NERD DEXXQc_Helz-like Feature: gene Location: 185-1261 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 242-476 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 242-476 bp Feature: gene Location: 1295-1654 bp Feature: gene Location: 2181-3041 bp Feature: domain Description: NERD Location: 2226-2514 bp Feature: domain Description: NERD Location: 2226-2514 bp Feature: domain Description: DEXXQc_Helz-like Location: 2841-3015 bp Feature: domain Description: DEXXQc_Helz-like Location: 2841-3 015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9, NERD (pfam08378), DEXXQc_Helz-like (cd18038)

Seq: JAADAO010000601.1 Microcystis aeruginosa G13-07 Ga0188009_102726, whole genome shotgun sequence (2940 bp)
Overview 1 RT 1: 251-2831 bp Neighborhood of RT #1 [251, 2878] INT_C_like_5 RVT-CRISPR cas1 Feature: gene Location: 251-1324 bp Feature: domain Description: INT_C_like_5 Location: 767-1280 bp Feature: domain Description: INT_C_like_5 Location: 767-1280 bp Feature: gene Location: 1388-2878 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1553-2162 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1553-2162 bp Feature: domain Description: cas1 Location: 2345-2831 bp Feature: domain Description: cas1 Location: 234 5-2831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_5 (cd01195), RVT-CRISPR, cas1 (TIGR00287)