myRT

myRT report for GCA_009996405.1_ASM999640v1

Download annotations/find similar RTs

Seq: JAADAH010000053.1 Microcystis aeruginosa G11-01 Ga0188002_100441, whole genome shotgun sequence (22487 bp)
Overview 1 RT 1: 420-2778 bp Neighborhood of RT #1 [420, 2778] RVT-CRISPR Cas1_I-II-III Feature: gene Location: 420-1394 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 627-1233 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 627-1 233 bp Feature: gene Location: 1397-2503 bp Feature: domain Description: Cas1_I-II-III Location: 1508-2465 bp Feature: domain Description: Cas1 _I-II-III Location: 1 508-2465 bp Feature: gene Location: 2629-2778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: JAADAH010000100.1 Microcystis aeruginosa G11-01 Ga0188002_100564, whole genome shotgun sequence (11478 bp)
Overview 1 RT 1: 1-3786 bp Neighborhood of RT #1 [1, 3800] RVT-DGRs Avd_like YfmG Feature: gene Location: 1-141 bp Feature: gene Location: 266-589 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 479-575 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 479-575 bp Feature: gene Location: 579-965 bp Feature: domain Description: Avd_like Location: 609-918 bp Feature: domain Description: Avd_like Location: 609-918 bp Feature: gene Location: 1029-3800 bp Feature: domain Description: YfmG Location: 3048-3786 bp Feature: domain Description: YfmG Location: 3048-3786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)

Seq: JAADAH010000535.1 Microcystis aeruginosa G11-01 Ga0188002_101770, whole genome shotgun sequence (2610 bp)
Overview 1 RT 1: 68-2263 bp Neighborhood of RT #1 [68, 2307] RVT-CRISPR-like Phage_int_SAM_1 INT_C_like_5 Feature: gene Location: 68-1117 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 257-866 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 257-866 bp Feature: gene Location: 1171-2307 bp Feature: domain Description: Phage_int_SAM_1 Location: 1429-1660 bp Feature: domain Description: Phage_int_SAM_1 Location: 1429-1660 bp Feature: domain Description: INT_C_like_5 Location: 1750-2263 bp Feature: domain Description: INT_C_like_5 Location: 1750-2263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Phage_int_SAM_1 (pfam02899), INT_C_like_5 (cd01195)

Seq: JAADAH010000669.1 Microcystis aeruginosa G11-01 Ga0188002_103341, whole genome shotgun sequence (1541 bp)
Overview 1 RT 1: 469-625 bp Neighborhood of RT #1 [469, 1410] RVT-UG9 Feature: gene Location: 469-1410 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 472-625 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4 72-625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9