myRT

myRT report for GCA_009996555.1_ASM999655v1

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Seq: JAACZX010000460.1 Chitinophagaceae bacterium isolate SCNH_8 NODE_18_length_14964_cov_3.871803, whole genome shotgun sequence (14964 bp)
Overview 1 RT 1: 6572-14962 bp Neighborhood of RT #1 [6572, 14962] DUF4145 HsdR RVT-Retrons NERD DEXQc_UvrD DExxQc_SF1-N COG3972 Feature: gene Location: 6572-9940 bp Feature: domain Description: DUF4145 Location: 6635-6911 bp Feature: domain Description: DUF41 45 Location: 6635-691 1 bp Feature: domain Description: HsdR Location: 7196-9881 bp Feature: domain Description: HsdR Location: 71 96-9881 bp Feature: gene Location: 9930-10796 bp Feature: gene Location: 10793-12217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11108-11681 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 1 08-1 1 681 bp Feature: gene Location: 12596-14737 bp Feature: domain Description: NERD Location: 12653-12941 bp Feature: domain Description: NERD Location: 1 2653-1 2941 bp Feature: domain Description: DEXQc_UvrD Location: 13265-13634 bp Feature: domain Description: DEXQc_UvrD Location: 1 3265-1 3634 bp Feature: domain Description: DExxQc_SF1-N Location: 13652-13778 bp Feature: domain Description: DExxQc_SF1 -N Location: 1 3652-1 3778 bp Feature: domain Description: COG3972 Location: 14501-14720 bp Feature: domain Description: COG3972 Location: 1 4501 -1 4720 bp Feature: gene Location: 14747-14962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, NERD (pfam08378), DEXQc_UvrD (cd17932), DExxQc_SF1-N (cd17914), COG3972 (Superfamily I DNA and RNA helicases )

Seq: JAACZX010000464.1 Chitinophagaceae bacterium isolate SCNH_8 NODE_27_length_13286_cov_3.917782, whole genome shotgun sequence (13286 bp)
Overview 1 RT 1: 1-3801 bp Neighborhood of RT #1 [1, 4505] RVT-Retrons AAA_15 Feature: gene Location: 1-192 bp Feature: gene Location: 366-1250 bp Feature: gene Location: 1394-2278 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1502-2042 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1502 -2 042 bp Feature: gene Location: 2437-2574 bp Feature: gene Location: 2679-4505 bp Feature: domain Description: AAA_15 Location: 2682-3801 bp Feature: domain Description: AAA_15 Location: 2 682 -3801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175)