myRT

myRT report for GCA_010015475.1_ASM1001547v1

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Seq: SSNI01000007.1 Pontibacter sp. TRT317 Scaffold7_1, whole genome shotgun sequence (205017 bp)
Overview 1 RT 1: 155427-160242 bp Neighborhood of RT #1 [155427, 160244] HicB RVT-UG13 DUF4145 PRK00971 Feature: gene Location: 155427-155582 bp Feature: gene Location: 155707-155913 bp Feature: domain Description: HicB Location: 155710-155869 bp Feature: domain Description: HicB Location: 1 5571 0-1 55869 bp Feature: gene Location: 156063-157853 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 156480-156948 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 56480-1 56948 bp Feature: gene Location: 158364-159086 bp Feature: domain Description: DUF4145 Location: 158721-158970 bp Feature: domain Description: DUF41 45 Location: 1 58721 -1 58970 bp Feature: gene Location: 159315-160244 bp Feature: domain Description: PRK00971 Location: 159336-160242 bp Feature: domain Description: PRK00971 Location: 1 59336-1 60242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicB (pfam05534), RVT-UG13, DUF4145 (pfam13643), PRK00971 (glutaminase; Provisional)

Seq: SSNI01000067.1 Pontibacter sp. TRT317 Scaffold65_1, whole genome shotgun sequence (12744 bp)
Overview 1 RT 1: 112-3321 bp Neighborhood of RT #1 [112, 3321] RVT-GII GIIM Feature: gene Location: 112-459 bp Feature: gene Location: 555-728 bp Feature: gene Location: 1116-2432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1311-1926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1311-192 6 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2211 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2 2 11 bp Feature: gene Location: 2477-2827 bp Feature: gene Location: 2893-3321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SSNI01000093.1 Pontibacter sp. TRT317 Scaffold91_1, whole genome shotgun sequence (3048 bp)
Overview 1 RT 1: 777-2470 bp Neighborhood of RT #1 [777, 2478] RVT-GII HxlR Feature: gene Location: 777-1196 bp Feature: gene Location: 1460-1618 bp Feature: gene Location: 1641-1877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1749-1875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1749-1875 bp Feature: gene Location: 1914-2069 bp Feature: gene Location: 2140-2478 bp Feature: domain Description: HxlR Location: 2188-2470 bp Feature: domain Description: HxlR Location: 2188-2470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HxlR (pfam01638)