myRT

myRT report for GCA_010026765.1_ASM1002676v1

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Seq: RGWU01000301.1 Bacterium isolate WB9_3_067 contig_100_300, whole genome shotgun sequence (3840 bp)
Overview 1 RT 1: 2-3230 bp Neighborhood of RT #1 [2, 3607] INT_IntI_C Zn_Tnp_IS91 Y2_Tnp RVT-GII Feature: gene Location: 2-664 bp Feature: domain Description: INT_IntI_C Location: 101-608 bp Feature: domain Description: INT_IntI_C Location: 1 01 -608 bp Feature: gene Location: 670-1791 bp Feature: domain Description: Zn_Tnp_IS91 Location: 718-985 bp Feature: domain Description: Zn_Tnp_IS91 Location: 71 8-985 bp Feature: domain Description: Y2_Tnp Location: 1111-1678 bp Feature: domain Description: Y2_Tnp Location: 1 1 1 1 -1 678 bp Feature: gene Location: 2177-3607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2537-3230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2537-3230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_IntI_C (cd01193), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)

Seq: RGWU01000391.1 Bacterium isolate WB9_3_067 contig_100_390, whole genome shotgun sequence (3151 bp)
Overview 1 RT 1: 3-2809 bp Neighborhood of RT #1 [3, 2841] PHA02517 RVT_N RVT-GII GIIM rve_3 Feature: gene Location: 3-536 bp Feature: domain Description: PHA02517 Location: 96-516 bp Feature: domain Description: PHA02 517 Location: 96-516 bp Feature: gene Location: 799-2478 bp Feature: RT Description: RVT_N Location: 1048-1291 bp Feature: RT Description: RVT_N Location: 1048-12 91 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336-1963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336-1963 bp Feature: domain Description: GIIM Note: maturase Location: 2023-2248 bp Feature: domain Description: GIIM Note: maturase Location: 2 02 3-2 2 48 bp Feature: gene Location: 2602-2841 bp Feature: domain Description: rve_3 Location: 2611-2809 bp Feature: domain Description: rve_3 Location: 2 611-2 809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), PHA02517 (putative transposase OrfB; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: RGWU01000435.1 Bacterium isolate WB9_3_067 contig_100_434, whole genome shotgun sequence (2850 bp)
Overview 1 RT 1: 3-2844 bp Neighborhood of RT #1 [3, 2849] GT4_mannosyltransferase-like GH130 RVT-GII GIIM Por_Secre_tail Feature: gene Location: 3-233 bp Feature: domain Description: GT4_mannosyltransferase-like Location: 33-126 bp Feature: domain Description: GT4_mannosyltransferase-like Location: 3 3 -126 bp Feature: gene Location: 230-661 bp Feature: domain Description: GH130 Location: 260-617 bp Feature: domain Description: GH13 0 Location: 260-617 bp Feature: gene Location: 1102-2349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312-1972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 12-1972 bp Feature: domain Description: GIIM Note: maturase Location: 2053-2272 bp Feature: domain Description: GIIM Note: maturase Location: 2053 -2272 bp Feature: gene Location: 2493-2849 bp Feature: domain Description: Por_Secre_tail Location: 2637-2844 bp Feature: domain Description: Por_Secre_tail Location: 263 7-2844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GH130 (cd18615), Por_Secre_tail (TIGR04183), GT4_mannosyltransferase-like (cd03822)

Seq: RGWU01000476.1 Bacterium isolate WB9_3_067 contig_100_475, whole genome shotgun sequence (2610 bp)
Overview 1 RT 1: 371-1765 bp Neighborhood of RT #1 [371, 1765] RVT-GII KOG4768 Feature: gene Location: 371-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-980 bp Feature: domain Description: KOG4768 Location: 1010-1196 bp Feature: domain Description: KOG4 768 Location: 1010-1196 bp Feature: gene Location: 1369-1611 bp Feature: gene Location: 1631-1765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )