myRT

myRT report for GCA_010066845.1_ASM1006684v1

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Seq: QZEH01000019.1 Enterococcus asini strain J3 Scaffold17_1, whole genome shotgun sequence (20422 bp)
Overview 1 RT 1: 3437-9312 bp Neighborhood of RT #1 [3437, 9365] ParAB_family RVT-GII RVT-GII HNHc PolY_Pol_V_umuC PRK03103 Feature: gene Location: 3437-3862 bp Feature: gene Location: 3879-4691 bp Feature: domain Description: ParAB_family Location: 3894-4488 bp Feature: domain Description: ParAB_family Location: 3894-4488 bp Feature: gene Location: 6099-6860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6408-6858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6408-6858 bp Feature: gene Location: 6942-7961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6960-7146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6960-71 46 bp Feature: domain Description: HNHc Note: nucleases Location: 7701-7827 bp Feature: domain Description: HNHc Note: nucleases Location: 7701 -7827 bp Feature: gene Location: 7989-8606 bp Feature: domain Description: PolY_Pol_V_umuC Location: 8082-8598 bp Feature: domain Description: PolY_Pol_V_umuC Location: 8082-8598 bp Feature: gene Location: 8628-9365 bp Feature: domain Description: PRK03103 Location: 8631-9312 bp Feature: domain Description: PRK031 03 Location: 8631 -931 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParAB_family (cd02042), RVT-GII, HNHc (smart00507), PolY_Pol_V_umuC (cd01700), PRK03103 (DNA polymerase IV; Reviewed)

Seq: QZEH01000007.1 Enterococcus asini strain J3 Scaffold7_1, whole genome shotgun sequence (139716 bp)
Overview 1 RT 1: 4508-15366 bp Neighborhood of RT #1 [4508, 15383] RVT-Retrons SieB RVT-UG3 RVT-UG8 Phage_int_SAM_3 INT_ICEBs1_C_like HTH_17 Feature: gene Location: 4508-4705 bp Feature: gene Location: 4964-5170 bp Feature: gene Location: 5549-7333 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5684-6287 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5684-62 87 bp Feature: gene Location: 7592-8821 bp Feature: gene Location: 8884-9489 bp Feature: domain Description: SieB Location: 8941-9376 bp Feature: domain Description: SieB Location: 8941-9376 bp Feature: gene Location: 9880-10998 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 10081-10516 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 10081-10516 bp Feature: gene Location: 11210-13297 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 11771-12215 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 11771-12 2 15 bp Feature: gene Location: 13804-15039 bp Feature: domain Description: Phage_int_SAM_3 Location: 14101-14173 bp Feature: domain Description: Phage_int_SAM_3 Location: 14101-14173 bp Feature: domain Description: INT_ICEBs1_C_like Location: 14404-14962 bp Feature: domain Description: INT_ICEBs1_C_like Location: 14404-14962 bp Feature: gene Location: 15108-15383 bp Feature: domain Description: HTH_17 Location: 15231-15366 bp Feature: domain Description: HTH_17 Location: 152 31-15366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, SieB (pfam14163), RVT-UG3, RVT-UG8, Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), HTH_17 (pfam12728)