myRT

myRT report for GCA_010078375.1_ASM1007837v1

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Seq: WUQD01000016.1 Salmonella enterica strain 15E059 NODE_16_length_81626_cov_21.3814, whole genome shotgun sequence (81626 bp)
Overview 1 RT 1: 31944-36869 bp Neighborhood of RT #1 [31944, 36877] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31944-32666 bp Feature: domain Description: INT_P4_C Location: 32064-32595 bp Feature: domain Description: INT_P4_C Location: 32064-32595 bp Feature: gene Location: 32991-33953 bp Feature: gene Location: 33953-34888 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34064-34649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34064-34649 bp Feature: gene Location: 35136-35345 bp Feature: gene Location: 35690-36877 bp Feature: domain Description: PRK10473 Location: 35693-36869 bp Feature: domain Description: PRK1 0473 Location: 35693-36869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: WUQD01000002.1 Salmonella enterica strain 15E059 NODE_2_length_635098_cov_20.99, whole genome shotgun sequence (635098 bp)
Overview 1 RT 1: 168842-175147 bp Neighborhood of RT #1 [168842, 175149] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 168842-170542 bp Feature: domain Description: 5 Location: 170066-170360 bp Feature: domain Description: 5 Location: 170066-170360 bp Feature: gene Location: 170672-170839 bp Feature: gene Location: 171449-172213 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 171572-172025 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 171572 -172 02 5 bp Feature: gene Location: 172537-173043 bp Feature: domain Description: PRK10201 Location: 172540-173038 bp Feature: domain Description: PRK102 01 Location: 172 540-173038 bp Feature: gene Location: 173167-175149 bp Feature: domain Description: PRK05658 Location: 173305-175147 bp Feature: domain Description: PRK05658 Location: 173305-175147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)