myRT

myRT report for GCA_010091925.1_ASM1009192v1

Download annotations/find similar RTs

Seq: WVID01000011.1 Nostoc sp. B(2019) strain B NODE_11_length_279195_cov_48.692589, whole genome shotgun sequence (279195 bp)
Overview 1 RT 1: 194983-199301 bp Neighborhood of RT #1 [194983, 199301] DUF3598 COG4634 RVT-UG13 Aat Feature: gene Location: 194983-195813 bp Feature: domain Description: DUF3598 Location: 195013-195802 bp Feature: domain Description: DUF3598 Location: 1 9501 3-1 95802 bp Feature: gene Location: 195871-196173 bp Feature: domain Description: COG4634 Location: 195874-196168 bp Feature: domain Description: COG4634 Location: 1 95874-1 961 68 bp Feature: gene Location: 196715-198055 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 197126-197600 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 971 26-1 97600 bp Feature: gene Location: 198259-198834 bp Feature: domain Description: Aat Location: 198265-198814 bp Feature: domain Description: Aat Location: 1 98265-1 9881 4 bp Feature: gene Location: 198972-199301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3598 (pfam12204), COG4634 (Predicted nuclease, contains PIN domain, potential toxin-antitoxin system component ), RVT-UG13, Aat (COG2360)

Seq: WVID01000018.1 Nostoc sp. B(2019) strain B NODE_18_length_183147_cov_48.275955, whole genome shotgun sequence (183147 bp)
Overview 1 RT 1: 179124-183072 bp Neighborhood of RT #1 [179124, 183146] CopZ alaS RVT-UG7 Feature: gene Location: 179124-179324 bp Feature: domain Description: CopZ Location: 179133-179319 bp Feature: domain Description: CopZ Location: 179133-179319 bp Feature: gene Location: 179607-182267 bp Feature: domain Description: alaS Location: 179631-182253 bp Feature: domain Description: alaS Location: 179631-182 2 53 bp Feature: gene Location: 182352-183146 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 182760-183072 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 182 760-183072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CopZ (COG2608), alaS (TIGR00344), RVT-UG7