myRT

myRT report for GCA_010119115.1_ASM1011911v1

Download annotations/find similar RTs

Seq: JAACVG010001172.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_123576, whole genome shotgun sequence (982 bp)
Overview 1 RT 1: 1-538 bp Neighborhood of RT #1 [1, 570] RVT-DGRs Feature: gene Location: 1-570 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 208-538 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 208-538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAACVG010001179.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_126721, whole genome shotgun sequence (1847 bp)
Overview 1 RT 1: 3-1823 bp Neighborhood of RT #1 [3, 1846] RVT-DGRs RVT-DGRs Avd_like pfam03781 Feature: gene Location: 3-587 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 213-333 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 13-333 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 426-528 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42 6-52 8 bp Feature: gene Location: 677-1111 bp Feature: domain Description: Avd_like Location: 764-1067 bp Feature: domain Description: Avd_like Location: 764-1067 bp Feature: gene Location: 1214-1846 bp Feature: domain Description: pfam03781 Location: 1220-1823 bp Feature: domain Description: pfam03781 Location: 12 2 0-182 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs, Avd_like (cd16376)

Seq: JAACVG010000008.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_15267, whole genome shotgun sequence (4561 bp)
Overview 1 RT 1: 1-4100 bp Neighborhood of RT #1 [1, 4558] RVT-DGRs ARS_like Feature: gene Location: 1-564 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7-370 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7-3 70 bp Feature: gene Location: 611-3064 bp Feature: gene Location: 3101-4558 bp Feature: domain Description: ARS_like Location: 3104-4100 bp Feature: domain Description: ARS_like Location: 3 104-4100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAACVG010000510.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_20390, whole genome shotgun sequence (3747 bp)
Overview 1 RT 1: 2061-3541 bp Neighborhood of RT #1 [2061, 3744] YiaG RVT-DGRs Feature: gene Location: 2061-2384 bp Feature: domain Description: YiaG Location: 2172-2355 bp Feature: domain Description: YiaG Location: 2172-2355 bp Feature: gene Location: 2347-2721 bp Feature: gene Location: 3217-3744 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3271-3541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3271-354 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaG (COG2944), RVT-DGRs

Seq: JAACVG010000443.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_33714, whole genome shotgun sequence (3708 bp)
Overview 1 RT 1: 1174-3490 bp Neighborhood of RT #1 [1174, 3705] RVT-DGRs RVT-DGRs Feature: gene Location: 1174-2412 bp Feature: gene Location: 2481-2798 bp Feature: gene Location: 2818-3705 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2821-2875 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2821-2875 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2974-3490 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2974-3490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAACVG010000182.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_3650, whole genome shotgun sequence (11594 bp)
Overview 1 RT 1: 255-4602 bp Neighborhood of RT #1 [255, 4643] Avd_like RVT-DGRs RVT-DGRs NT_KNTase_like DUF4058 Feature: gene Location: 255-674 bp Feature: domain Description: Avd_like Location: 288-594 bp Feature: domain Description: Avd_like Location: 288-594 bp Feature: gene Location: 1339-2535 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1564-1687 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 156 4-16 87 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1786-2302 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1786 -2302 bp Feature: gene Location: 3050-3562 bp Feature: domain Description: NT_KNTase_like Location: 3101-3251 bp Feature: domain Description: NT_KNTase_like Location: 3101-3251 bp Feature: gene Location: 3846-4643 bp Feature: domain Description: DUF4058 Location: 3849-4602 bp Feature: domain Description: DUF4058 Location: 3849-46 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF4058 (pfam13267)

Seq: JAACVG010000891.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_50300, whole genome shotgun sequence (2559 bp)
Overview 1 RT 1: 3-2464 bp Neighborhood of RT #1 [3, 2487] Clp_N RVT-DGRs Avd_like Feature: gene Location: 3-389 bp Feature: domain Description: Clp_N Location: 60-201 bp Feature: domain Description: Clp_N Location: 60-201 bp Feature: gene Location: 995-2065 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1202-1847 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1202-1847 bp Feature: gene Location: 2128-2487 bp Feature: domain Description: Avd_like Location: 2161-2464 bp Feature: domain Description: Avd_like Location: 2161-2464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), Clp_N (pfam02861), RVT-DGRs

Seq: JAACVG010000941.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_57227, whole genome shotgun sequence (1793 bp)
Overview 1 RT 1: 3-1484 bp Neighborhood of RT #1 [3, 1549] RVT-DGRs RVT-DGRs Y1_Tnp Feature: gene Location: 3-770 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 228-351 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 228 -351 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 483-618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48 3-618 bp Feature: gene Location: 1121-1549 bp Feature: domain Description: Y1_Tnp Location: 1145-1484 bp Feature: domain Description: Y1_Tnp Location: 1145-148 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), RVT-DGRs

Seq: JAACVG010001070.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_88671, whole genome shotgun sequence (1564 bp)
Overview 1 RT 1: 148-1120 bp Neighborhood of RT #1 [148, 1431] RVT-DGRs RVT-DGRs Feature: gene Location: 148-1431 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 391-514 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39 1-514 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 601-1120 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 601-1120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAACVG010000356.1 Armatimonadetes bacterium isolate CG_2015-01_66_30 CG_2015-01_curated_scaffold_9380, whole genome shotgun sequence (8739 bp)
Overview 1 RT 1: 1845-7676 bp Neighborhood of RT #1 [1845, 7750] nirV Hrd RVT-DGRs DUF4091 COG2865 Feature: gene Location: 1845-2009 bp Feature: domain Description: nirV Location: 1863-1989 bp Feature: domain Description: nirV Location: 1863-1989 bp Feature: gene Location: 2176-2655 bp Feature: domain Description: Hrd Location: 2413-2620 bp Feature: domain Description: Hrd Location: 2413-2620 bp Feature: gene Location: 2716-3075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2719-2869 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2719-2869 bp Feature: gene Location: 3874-6363 bp Feature: domain Description: DUF4091 Location: 5899-6109 bp Feature: domain Description: DUF4091 Location: 5899-610 9 bp Feature: gene Location: 6584-7750 bp Feature: domain Description: COG2865 Location: 6614-7676 bp Feature: domain Description: COG2865 Location: 6614-7676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nirV (LOAD_nirV), Hrd (LOAD_Hrd), RVT-DGRs, DUF4091 (pfam13320), COG2865 (Predicted transcriptional regulator, contains HTH domain )