myRT

myRT report for GCA_010119245.1_ASM1011924v1

Download annotations/find similar RTs

Seq: WNKG01000002.1 Cyclobacterium sp. SYSU L10167 NODE_2_length_715737_cov_131.859_ID_8437, whole genome shotgun sequence (715737 bp)
Overview 1 RT 1: 6751-12921 bp 2 RT 2: 18771-23522 bp Neighborhood of RT #1 [6751, 12998] AAA_13 AAA_13 AAA_13 RVT-GII GIIM MhpC Neighborhood of RT #2 [18771, 23581] PIN_3 RVT-GII Beta-lactamase MopB_3 dmsA_ynfE Feature: gene Location: 6751-9312 bp Feature: domain Description: AAA_13 Location: 7063-7330 bp Feature: domain Description: AAA_1 3 Location: 7063-7330 bp Feature: domain Description: AAA_13 Location: 7369-7786 bp Feature: domain Description: AAA_1 3 Location: 7369-7786 bp Feature: domain Description: AAA_13 Location: 7891-8938 bp Feature: domain Description: AAA_1 3 Location: 7891 -8938 bp Feature: gene Location: 9490-10068 bp Feature: gene Location: 10459-11532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10654-11269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0654-1 1 269 bp Feature: domain Description: GIIM Note: maturase Location: 11344-11527 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 344-1 1 527 bp Feature: gene Location: 11535-11891 bp Feature: gene Location: 12165-12998 bp Feature: domain Description: MhpC Location: 12234-12921 bp Feature: domain Description: MhpC Location: 1 2234-1 2921 bp Feature: gene Location: 18771-19028 bp Feature: gene Location: 19025-19447 bp Feature: domain Description: PIN_3 Location: 19037-19373 bp Feature: domain Description: PIN_3 Location: 1 9037-1 9373 bp Feature: gene Location: 19512-19667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19515-19650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 951 5-1 9650 bp Feature: gene Location: 19834-20949 bp Feature: domain Description: Beta-lactamase Location: 19900-20908 bp Feature: domain Description: Beta-lactamase Location: 1 9900-20908 bp Feature: gene Location: 21401-23581 bp Feature: domain Description: MopB_3 Location: 21551-23153 bp Feature: domain Description: MopB_3 Location: 21 551 -231 53 bp Feature: domain Description: dmsA_ynfE Location: 23168-23522 bp Feature: domain Description: dmsA_ynfE Location: 231 68-23522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), RVT-GII, GIIM (pfam08388), MhpC (COG0596), PIN_3 (pfam13470), Beta-lactamase (pfam00144), MopB_3 (cd02766), dmsA_ynfE (TIGR02166)

Seq: WNKG01000008.1 Cyclobacterium sp. SYSU L10167 NODE_8_length_371125_cov_137.876_ID_8449, whole genome shotgun sequence (371125 bp)
Overview 1 RT 1: 244736-251160 bp Neighborhood of RT #1 [244736, 251219] DDE_Tnp_IS1595 RVT-UG2 DUF4145 HsdR Feature: gene Location: 244736-245266 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 244769-245180 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 2 44769-2 45180 bp Feature: gene Location: 245277-245540 bp Feature: gene Location: 245737-247302 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 245986-246958 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 45986-2 46958 bp Feature: gene Location: 247472-247699 bp Feature: gene Location: 247788-251219 bp Feature: domain Description: DUF4145 Location: 247848-248127 bp Feature: domain Description: DUF4145 Location: 2 47848-2 4812 7 bp Feature: domain Description: HsdR Location: 248433-251160 bp Feature: domain Description: HsdR Location: 2 48433-2 51160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1595 (pfam12762), RVT-UG2, DUF4145 (pfam13643), HsdR (COG4096)