myRT

myRT report for GCA_010119315.1_ASM1011931v1

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Seq: VSTB01000115.1 Enterococcus faecium strain UIC2 Contig_115, whole genome shotgun sequence (3377 bp)
Overview 1 RT 1: 41-3300 bp Neighborhood of RT #1 [41, 3332] RVT-AbiP2 HsdM Feature: gene Location: 41-1516 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: gene Location: 1854-3332 bp Feature: domain Description: HsdM Location: 1875-3300 bp Feature: domain Description: HsdM Location: 1 875-3300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: VSTB01000122.1 Enterococcus faecium strain UIC2 Contig_122, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: VSTB01000124.1 Enterococcus faecium strain UIC2 Contig_124, whole genome shotgun sequence (2714 bp)
Overview 1 RT 1: 384-2476 bp Neighborhood of RT #1 [384, 2592] RVT-GII HNHc Feature: gene Location: 384-614 bp Feature: gene Location: 733-2592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1783 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2476 bp Feature: domain Description: HNHc Note: nucleases Location: 23 3 8-2476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: VSTB01000125.1 Enterococcus faecium strain UIC2 Contig_125, whole genome shotgun sequence (2685 bp)
Overview 1 RT 1: 115-1072 bp Neighborhood of RT #1 [115, 1899] RVT-GII Feature: gene Location: 115-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VSTB01000092.1 Enterococcus faecium strain UIC2 Contig_92, whole genome shotgun sequence (5478 bp)
Overview 1 RT 1: 388-4279 bp Neighborhood of RT #1 [388, 4398] RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 388-621 bp Feature: gene Location: 808-2685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1123-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1123-1861 bp Feature: domain Description: HNHc Note: nucleases Location: 2419-2572 bp Feature: domain Description: HNHc Note: nucleases Location: 2419-25 72 bp Feature: gene Location: 2873-3193 bp Feature: gene Location: 3193-4398 bp Feature: domain Description: Glucosaminidase Location: 3469-3865 bp Feature: domain Description: Glucosaminidase Location: 3469-3865 bp Feature: domain Description: Peptidase_M23 Location: 4042-4279 bp Feature: domain Description: Peptidase_M23 Location: 4042-4279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)