myRT

myRT report for GCA_010122465.1_ASM1012246v1

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Seq: WLZY01000001.1 Phytoactinopolyspora sp. XMNu-373 Scaffold1, whole genome shotgun sequence (1381709 bp)
Overview 1 RT 1: 1371329-1375435 bp Neighborhood of RT #1 [1371329, 1375435] COG5421 COG5421 RVT-GII GIIM Feature: gene Location: 1371329-1372297 bp Feature: domain Description: COG5421 Location: 1371362-1371797 bp Feature: domain Description: COG5421 Location: 1 371 362-1 371 797 bp Feature: domain Description: COG5421 Location: 1371989-1372220 bp Feature: domain Description: COG5421 Location: 1 371 989-1 372220 bp Feature: gene Location: 1372430-1373845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372736-1373426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372736-1 373426 bp Feature: domain Description: GIIM Note: maturase Location: 1373498-1373717 bp Feature: domain Description: GIIM Note: maturase Location: 1 373498-1 37371 7 bp Feature: gene Location: 1374385-1375137 bp Feature: gene Location: 1375232-1375435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: WLZY01000017.1 Phytoactinopolyspora sp. XMNu-373 Scaffold17, whole genome shotgun sequence (43322 bp)
Overview 1 RT 1: 708-5546 bp Neighborhood of RT #1 [708, 5578] RVT-GII GIIM rve_2 UvrD PDDEXK_1 Feature: gene Location: 708-1991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 4-1590 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1881 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1881 bp Feature: gene Location: 2078-2254 bp Feature: domain Description: rve_2 Location: 2084-2234 bp Feature: domain Description: rve_2 Location: 2 084-2 2 34 bp Feature: gene Location: 2423-5578 bp Feature: domain Description: UvrD Location: 2486-4577 bp Feature: domain Description: UvrD Location: 2 486-4577 bp Feature: domain Description: PDDEXK_1 Location: 4823-5546 bp Feature: domain Description: PDDEXK_1 Location: 482 3-5546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_2 (pfam13333), UvrD (COG0210), PDDEXK_1 (pfam12705), RVT-GII, GIIM (pfam08388)