myRT

myRT report for GCA_010131535.1_ASM1013153v1

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Seq: WUBS01000011.1 Enterobacteriales bacterium SAP-6 contig11, whole genome shotgun sequence (211775 bp)
Overview 1 RT 1: 196742-201151 bp Neighborhood of RT #1 [196742, 201151] DUF2971 RVT-Retrons Feature: gene Location: 196742-197509 bp Feature: domain Description: DUF2971 Location: 197087-197300 bp Feature: domain Description: DUF2971 Location: 1 97087-1 97300 bp Feature: gene Location: 197737-198510 bp Feature: gene Location: 198972-199922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 199152-199686 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 991 52-1 99686 bp Feature: gene Location: 200246-200401 bp Feature: gene Location: 201011-201151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2971 (pfam11185), RVT-Retrons

Seq: WUBS01000037.1 Enterobacteriales bacterium SAP-6 contig37, whole genome shotgun sequence (5994 bp)
Overview 1 RT 1: 3-3386 bp Neighborhood of RT #1 [3, 3403] DDE_Tnp_IS66 RVT_N RVT-GII GIIM HNHc COG3436 Feature: gene Location: 3-389 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9-387 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9-387 bp Feature: gene Location: 511-2199 bp Feature: RT Description: RVT_N Location: 559-802 bp Feature: RT Description: RVT_N Location: 559-802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847-1489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847-1489 bp Feature: domain Description: GIIM Note: maturase Location: 1543-1777 bp Feature: domain Description: GIIM Note: maturase Location: 1543-1777 bp Feature: domain Description: HNHc Note: nucleases Location: 1993-2155 bp Feature: domain Description: HNHc Note: nucleases Location: 1993-2 155 bp Feature: gene Location: 2351-2596 bp Feature: gene Location: 2792-3403 bp Feature: domain Description: COG3436 Location: 3074-3386 bp Feature: domain Description: COG3436 Location: 3074-3386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)