myRT

myRT report for GCA_010178635.2_ASM1017863v2

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Seq: JAAEBE020000007.1 Bacillus megaterium strain IN_327 tig00000008_np1212, whole genome shotgun sequence (187735 bp)
Overview 1 RT 1: 9467-14486 bp 2 RT 2: 154436-159329 bp Neighborhood of RT #1 [9467, 14486] REC REC MTAN RVT_N RVT-GII RVT-GII GIIM Neighborhood of RT #2 [154436, 159329] MTAN RVT_N RVT-GII GIIM Feature: gene Location: 9467-9919 bp Feature: domain Description: REC Location: 9479-9764 bp Feature: domain Description: REC Location: 9479-9764 bp Feature: gene Location: 9923-11146 bp Feature: domain Description: REC Location: 9947-10229 bp Feature: domain Description: REC Location: 9947-1 0229 bp Feature: domain Description: MTAN Location: 10397-11084 bp Feature: domain Description: MTAN Location: 1 0397-1 1 084 bp Feature: gene Location: 12182-12667 bp Feature: RT Description: RVT_N Location: 12266-12512 bp Feature: RT Description: RVT_N Location: 1 2266-1 251 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12566-12644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2566-1 2644 bp Feature: gene Location: 12768-13523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12774-13224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2774-1 3224 bp Feature: domain Description: GIIM Note: maturase Location: 13290-13491 bp Feature: domain Description: GIIM Note: maturase Location: 1 3290-1 3491 bp Feature: gene Location: 13624-13863 bp Feature: gene Location: 14046-14486 bp Feature: gene Location: 154436-154582 bp Feature: gene Location: 154665-155273 bp Feature: domain Description: MTAN Location: 154668-155229 bp Feature: domain Description: MTAN Location: 1 54668-1 55229 bp Feature: gene Location: 156293-157978 bp Feature: RT Description: RVT_N Location: 156377-156623 bp Feature: RT Description: RVT_N Location: 1 56377-1 56623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156677-157337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56677-1 57337 bp Feature: domain Description: GIIM Note: maturase Location: 157403-157637 bp Feature: domain Description: GIIM Note: maturase Location: 1 57403-1 57637 bp Feature: gene Location: 158161-158730 bp Feature: gene Location: 158769-159329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), REC (smart00448), MTAN (cd09008)

Seq: JAAEBE020000012.1 Bacillus megaterium strain IN_327 tig00000011_np1212, whole genome shotgun sequence (153805 bp)
Overview 1 RT 1: 10455-15301 bp 2 RT 2: 66535-72264 bp 3 RT 3: 89292-93682 bp 4 RT 4: 102299-106817 bp Neighborhood of RT #1 [10455, 15324] PBP1_LacI_sugar_binding_like PurR RVT_N RVT-GII RVT-GII GIIM DUF3231 Neighborhood of RT #2 [66535, 72299] STAS_RsbR_RsbS_like RVT_N RVT-GII RVT-GII GIIM PRK09986 MFS_YfcJ_like Neighborhood of RT #3 [89292, 93687] GINS PadR RVT_N RVT-GII GIIM YuxK Neighborhood of RT #4 [102299, 106817] PurR PurR RVT_N RVT-GII RVT-GII GIIM GIIM Feature: gene Location: 10455-10910 bp Feature: domain Description: PBP1_LacI_sugar_binding_like Location: 10461-10902 bp Feature: domain Description: PBP1_LacI_sugar_binding_like Location: 10461-10902 bp Feature: gene Location: 10952-11230 bp Feature: domain Description: PurR Location: 10964-11201 bp Feature: domain Description: PurR Location: 10964-112 01 bp Feature: gene Location: 12474-13118 bp Feature: RT Description: RVT_N Location: 12558-12804 bp Feature: RT Description: RVT_N Location: 12 558-12 804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12858-13041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 858-13041 bp Feature: gene Location: 13162-14160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13243-13519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 43-13519 bp Feature: domain Description: GIIM Note: maturase Location: 13588-13819 bp Feature: domain Description: GIIM Note: maturase Location: 13588-13819 bp Feature: gene Location: 14574-14717 bp Feature: gene Location: 14998-15324 bp Feature: domain Description: DUF3231 Location: 15004-15301 bp Feature: domain Description: DUF32 31 Location: 15004-15301 bp Feature: gene Location: 66535-67368 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 67009-67333 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 67009-67333 bp Feature: gene Location: 67509-67712 bp Feature: gene Location: 68122-68664 bp Feature: RT Description: RVT_N Location: 68206-68452 bp Feature: RT Description: RVT_N Location: 682 06-68452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68506-68584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68506-68584 bp Feature: gene Location: 68709-69806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68715-69165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68715-69165 bp Feature: domain Description: GIIM Note: maturase Location: 69231-69465 bp Feature: domain Description: GIIM Note: maturase Location: 692 31-69465 bp Feature: gene Location: 70034-70933 bp Feature: domain Description: PRK09986 Location: 70040-70898 bp Feature: domain Description: PRK09986 Location: 70040-70898 bp Feature: gene Location: 71118-72299 bp Feature: domain Description: MFS_YfcJ_like Location: 71166-72264 bp Feature: domain Description: MFS_YfcJ_like Location: 71166-72 2 64 bp Feature: gene Location: 89292-89633 bp Feature: domain Description: GINS Location: 89298-89628 bp Feature: domain Description: GINS Location: 892 98-8962 8 bp Feature: gene Location: 89630-89974 bp Feature: domain Description: PadR Location: 89648-89963 bp Feature: domain Description: PadR Location: 89648-89963 bp Feature: gene Location: 90405-92054 bp Feature: RT Description: RVT_N Location: 90453-90699 bp Feature: RT Description: RVT_N Location: 90453-90699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90753-91413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90753-91413 bp Feature: domain Description: GIIM Note: maturase Location: 91482-91713 bp Feature: domain Description: GIIM Note: maturase Location: 91482 -91713 bp Feature: gene Location: 92812-93399 bp Feature: gene Location: 93457-93687 bp Feature: domain Description: YuxK Location: 93493-93682 bp Feature: domain Description: YuxK Location: 93493-93682 bp Feature: gene Location: 102299-103009 bp Feature: domain Description: PurR Location: 102308-102959 bp Feature: domain Description: PurR Location: 102 308-102 959 bp Feature: gene Location: 103051-103329 bp Feature: domain Description: PurR Location: 103063-103300 bp Feature: domain Description: PurR Location: 103063-103300 bp Feature: gene Location: 104575-105348 bp Feature: RT Description: RVT_N Location: 104659-104905 bp Feature: RT Description: RVT_N Location: 104659-104905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104959-105343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104959-105343 bp Feature: gene Location: 105369-105830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105423-105618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10542 3-105618 bp Feature: domain Description: GIIM Note: maturase Location: 105687-105816 bp Feature: domain Description: GIIM Note: maturase Location: 105687-105816 bp Feature: gene Location: 105791-106258 bp Feature: domain Description: GIIM Note: maturase Location: 105800-105917 bp Feature: domain Description: GIIM Note: maturase Location: 105800-105917 bp Feature: gene Location: 106674-106817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP1_LacI_sugar_binding_like, PurR (COG1609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3231 (pfam11553), STAS_RsbR_RsbS_like (cd07041), PRK09986 (LysR family transcriptional regulator), MFS_YfcJ_like (cd17489), GINS (COG4817)
PadR (pfam03551), YuxK (COG3011)

Seq: JAAEBE020000008.1 Bacillus megaterium strain IN_327 tig00000025_np1212, whole genome shotgun sequence (5087266 bp)
Overview 1 RT 1: 902091-906060 bp 2 RT 2: 1079649-1087229 bp 3 RT 3: 2888701-2892004 bp Neighborhood of RT #1 [902091, 906068] SH3_16 Spr RVT-GII Intron_maturas2 HNHc AppF Neighborhood of RT #2 [1079649, 1087462] CphB CphB RocR RVT-GII Intron_maturas2 HNHc RocR GAT1_cyanophycinase Neighborhood of RT #3 [2888701, 2892004] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 902091-902228 bp Feature: gene Location: 902257-903060 bp Feature: domain Description: SH3_16 Location: 902434-902566 bp Feature: domain Description: SH3 _16 Location: 90243 4-902566 bp Feature: domain Description: Spr Location: 902782-903052 bp Feature: domain Description: Spr Location: 902782-903 052 bp Feature: gene Location: 903641-905449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903905-904730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903 905-90473 0 bp Feature: domain Description: Intron_maturas2 Location: 904808-905279 bp Feature: domain Description: Intron_maturas2 Location: 904808-905279 bp Feature: domain Description: HNHc Note: nucleases Location: 905279-905423 bp Feature: domain Description: HNHc Note: nucleases Location: 905279-905423 bp Feature: gene Location: 905526-905672 bp Feature: gene Location: 905685-906068 bp Feature: domain Description: AppF Location: 905697-906060 bp Feature: domain Description: AppF Location: 905697-906060 bp Feature: gene Location: 1079649-1081481 bp Feature: domain Description: CphB Location: 1079655-1079883 bp Feature: domain Description: CphB Location: 1079655-1079883 bp Feature: domain Description: CphB Location: 1080309-1081122 bp Feature: domain Description: CphB Location: 10803 09-1081122 bp Feature: gene Location: 1081701-1083074 bp Feature: domain Description: RocR Location: 1082292-1083015 bp Feature: domain Description: RocR Location: 1082292-1083 015 bp Feature: gene Location: 1083623-1085437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1083887-1084715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1083 887-1084715 bp Feature: domain Description: Intron_maturas2 Location: 1084793-1085087 bp Feature: domain Description: Intron_maturas2 Location: 1084793 -1085087 bp Feature: domain Description: HNHc Note: nucleases Location: 1085234-1085408 bp Feature: domain Description: HNHc Note: nucleases Location: 108523 4-1085408 bp Feature: gene Location: 1085577-1086272 bp Feature: domain Description: RocR Location: 1085583-1086087 bp Feature: domain Description: RocR Location: 1085583 -1086087 bp Feature: gene Location: 1086347-1087462 bp Feature: domain Description: GAT1_cyanophycinase Location: 1086557-1087229 bp Feature: domain Description: GAT1_cyanophycinase Location: 1086557-1087229 bp Feature: gene Location: 2888701-2888832 bp Feature: gene Location: 2888866-2889063 bp Feature: gene Location: 2889280-2890170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2889334-2889529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28893 3 4-2889529 bp Feature: domain Description: GIIM Note: maturase Location: 2889598-2889829 bp Feature: domain Description: GIIM Note: maturase Location: 2889598-2889829 bp Feature: gene Location: 2890191-2890928 bp Feature: RT Description: RVT_N Location: 2890239-2890485 bp Feature: RT Description: RVT_N Location: 289023 9-2890485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2890539-2890923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289053 9-2890923 bp Feature: gene Location: 2891494-2891628 bp Feature: gene Location: 2891681-2892004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_16 (pfam18348), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), AppF (COG4608), CphB (COG4242), RocR (COG3829), GAT1_cyanophycinase (cd03145), GIIM (pfam08388)
RVT_N (pfam13655)

Seq: JAAEBE020000005.1 Bacillus megaterium strain IN_327 tig00000027_np1212, whole genome shotgun sequence (65153 bp)
Overview 1 RT 1: 8391-13353 bp Neighborhood of RT #1 [8391, 13415] Nonheme_Ferritin RVT_N RVT-GII GIIM GATase1_PfpI_3 Feature: gene Location: 8391-8702 bp Feature: gene Location: 8721-9263 bp Feature: domain Description: Nonheme_Ferritin Location: 8730-9195 bp Feature: domain Description: Nonheme_Ferritin Location: 8730-9195 bp Feature: gene Location: 9614-11263 bp Feature: RT Description: RVT_N Location: 9662-9908 bp Feature: RT Description: RVT_N Location: 9662-9908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9962-10622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9962-10622 bp Feature: domain Description: GIIM Note: maturase Location: 10688-10922 bp Feature: domain Description: GIIM Note: maturase Location: 10688-10922 bp Feature: gene Location: 12296-12478 bp Feature: gene Location: 12834-13415 bp Feature: domain Description: GATase1_PfpI_3 Location: 12846-13353 bp Feature: domain Description: GATase1_PfpI_3 Location: 1284 6-13353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GATase1_PfpI_3 (cd03140), Nonheme_Ferritin (cd01055), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)