myRT

myRT report for GCA_010179695.1_ASM1017969v1

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Seq: JAAEHK010000009.1 Halomonas alkaliphila strain LS44 2745.82.con.0009, whole genome shotgun sequence (145891 bp)
Overview 1 RT 1: 55418-59145 bp 2 RT 2: 64245-71428 bp Neighborhood of RT #1 [55418, 59145] DUF1566 Avd_like RVT-DGRs Neighborhood of RT #2 [64245, 71430] groES groEL RVT_N RVT-GII GIIM HNH TrmJ YuiF Feature: gene Location: 55418-56008 bp Feature: domain Description: DUF1566 Location: 55664-55991 bp Feature: domain Description: DUF1 566 Location: 55664-55991 bp Feature: gene Location: 56032-56409 bp Feature: domain Description: Avd_like Location: 56059-56365 bp Feature: domain Description: Avd_like Location: 56059-56365 bp Feature: gene Location: 56628-57743 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56844-57528 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56844-57528 bp Feature: gene Location: 57783-58436 bp Feature: gene Location: 58675-59145 bp Feature: gene Location: 64245-64571 bp Feature: domain Description: groES Location: 64281-64566 bp Feature: domain Description: groES Location: 64281 -64566 bp Feature: gene Location: 64628-66271 bp Feature: domain Description: groEL Location: 64634-66254 bp Feature: domain Description: groEL Location: 64634-66254 bp Feature: gene Location: 67308-69008 bp Feature: RT Description: RVT_N Location: 67362-67602 bp Feature: RT Description: RVT_N Location: 67362-67602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67650-68295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67650-68295 bp Feature: domain Description: GIIM Note: maturase Location: 68349-68580 bp Feature: domain Description: GIIM Note: maturase Location: 68349-68580 bp Feature: domain Description: HNH Note: nucleases Location: 68820-68958 bp Feature: domain Description: HNH Note: nucleases Location: 68820-68958 bp Feature: gene Location: 69231-69974 bp Feature: domain Description: TrmJ Location: 69234-69960 bp Feature: domain Description: TrmJ Location: 69234-69960 bp Feature: gene Location: 70084-71430 bp Feature: domain Description: YuiF Location: 70087-71428 bp Feature: domain Description: YuiF Location: 70087-71 428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), TrmJ (COG0565)
YuiF (COG2056)