myRT

myRT report for GCA_010179725.1_ASM1017972v1

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Seq: JAAEFM010000102.1 Klebsiella pneumoniae strain blood_2014 NODE_102_length_676_cov_563.868114, whole genome shotgun sequence (676 bp)
Overview 1 RT 1: 2-359 bp Neighborhood of RT #1 [2, 673] RVT-GII Feature: gene Location: 2-673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAEFM010000020.1 Klebsiella pneumoniae strain blood_2014 NODE_20_length_103345_cov_82.592594, whole genome shotgun sequence (103345 bp)
Overview 1 RT 1: 31974-38827 bp Neighborhood of RT #1 [31974, 38844] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31974-32639 bp Feature: domain Description: INT_P4_C Location: 32079-32637 bp Feature: domain Description: INT_P4_C Location: 32 079-32 637 bp Feature: gene Location: 32900-33340 bp Feature: domain Description: Integrase_1 Location: 32906-33122 bp Feature: domain Description: Integrase_1 Location: 32 906-3312 2 bp Feature: gene Location: 33397-35475 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33805-34249 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33805-342 49 bp Feature: gene Location: 35475-38084 bp Feature: domain Description: FimD Location: 35532-38073 bp Feature: domain Description: FimD Location: 35532 -38073 bp Feature: gene Location: 38116-38844 bp Feature: domain Description: FimC Location: 38164-38827 bp Feature: domain Description: FimC Location: 38164-3882 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAEFM010000033.1 Klebsiella pneumoniae strain blood_2014 NODE_33_length_42657_cov_132.350869, whole genome shotgun sequence (42657 bp)
Overview 1 RT 1: 39818-42631 bp Neighborhood of RT #1 [39818, 42654] RVT-GII YjcC Feature: gene Location: 39818-40075 bp Feature: gene Location: 40146-40286 bp Feature: gene Location: 40672-40854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40780-40846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40780-40846 bp Feature: gene Location: 41386-41559 bp Feature: gene Location: 41629-42654 bp Feature: domain Description: YjcC Location: 41818-42631 bp Feature: domain Description: YjcC Location: 41818-4263 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YjcC (COG4943)

Seq: JAAEFM010000099.1 Klebsiella pneumoniae strain blood_2014 NODE_99_length_728_cov_562.513057, whole genome shotgun sequence (728 bp)
Overview 1 RT 1: 3-690 bp Neighborhood of RT #1 [3, 692] RVT-GII Feature: gene Location: 3-692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 05-690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII