myRT

myRT report for GCA_010364035.1_ASM1036403v1

Download annotations/find similar RTs

Seq: JAAFKP010000010.1 Staphylococcus aureus strain 68-009 NODE_10_length_80599_cov_50.6434, whole genome shotgun sequence (80599 bp)
Overview 1 RT 1: 1566-5691 bp Neighborhood of RT #1 [1566, 5696] RVT-GII GIIM YeiH RimL Feature: gene Location: 1566-1826 bp Feature: gene Location: 2242-2451 bp Feature: gene Location: 2503-3798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728-3343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728-3343 bp Feature: domain Description: GIIM Note: maturase Location: 3403-3637 bp Feature: domain Description: GIIM Note: maturase Location: 3403-3637 bp Feature: gene Location: 3875-4870 bp Feature: domain Description: YeiH Location: 3887-4862 bp Feature: domain Description: YeiH Location: 3887-4862 bp Feature: gene Location: 5151-5696 bp Feature: domain Description: RimL Location: 5169-5691 bp Feature: domain Description: RimL Location: 51 69-5691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YeiH (COG2855), RimL (COG1670)

Seq: JAAFKP010000005.1 Staphylococcus aureus strain 68-009 NODE_5_length_91943_cov_67.693, whole genome shotgun sequence (91943 bp)
Overview 1 RT 1: 86996-91157 bp Neighborhood of RT #1 [86996, 91180] SsuE RVT-GII GIIM Rve Feature: gene Location: 86996-87562 bp Feature: domain Description: SsuE Location: 86999-87530 bp Feature: domain Description: SsuE Location: 86999-87530 bp Feature: gene Location: 87858-88067 bp Feature: gene Location: 88119-89414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88344-88959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88344-88959 bp Feature: domain Description: GIIM Note: maturase Location: 89019-89253 bp Feature: domain Description: GIIM Note: maturase Location: 89019-892 53 bp Feature: gene Location: 90506-91180 bp Feature: domain Description: Rve Location: 90512-91157 bp Feature: domain Description: Rve Location: 90512 -91157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SsuE (COG0431), RVT-GII, GIIM (pfam08388), Rve (COG3316)