myRT

myRT report for GCA_010365115.1_ASM1036511v1

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Seq: JAAFGX010000165.1 Paludibacter sp. isolate Bin2_4 scaffold_4113, whole genome shotgun sequence (6108 bp)
Overview 1 RT 1: 3-5904 bp Neighborhood of RT #1 [3, 5936] M28_like_PA M28_like_PA RVT-UG2 Arginase Feature: gene Location: 3-659 bp Feature: domain Description: M28_like_PA Location: 111-297 bp Feature: domain Description: M28_like_PA Location: 1 1 1 -297 bp Feature: domain Description: M28_like_PA Location: 558-660 bp Feature: domain Description: M28_like_PA Location: 558-660 bp Feature: gene Location: 1268-1789 bp Feature: gene Location: 1835-2887 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2087-2864 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2087-2864 bp Feature: gene Location: 3299-4660 bp Feature: gene Location: 4974-5936 bp Feature: domain Description: Arginase Location: 4989-5904 bp Feature: domain Description: Arginase Location: 4989-5904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M28_like_PA (cd05661), RVT-UG2, Arginase (pfam00491)

Seq: JAAFGX010000042.1 Paludibacter sp. isolate Bin2_4 scaffold_490, whole genome shotgun sequence (34561 bp)
Overview 1 RT 1: 14064-22120 bp Neighborhood of RT #1 [14064, 22269] DUF262 COG3472 PRK14975 RVT-UG9 ComA-like_MBL-fold RMtype1_S_MmaGORF2198P_TRD1-CR1_like RMtype1_S_MmaGORF2198P_TRD1-CR1_like Feature: gene Location: 14064-15854 bp Feature: domain Description: DUF262 Location: 14100-14712 bp Feature: domain Description: DUF2 62 Location: 14100-14712 bp Feature: domain Description: COG3472 Location: 15078-15831 bp Feature: domain Description: COG3472 Location: 15078-15831 bp Feature: gene Location: 15915-17501 bp Feature: domain Description: PRK14975 Location: 16389-17430 bp Feature: domain Description: PRK14975 Location: 16389-17430 bp Feature: gene Location: 17509-19971 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 18484-19138 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 18484-19138 bp Feature: gene Location: 19968-21002 bp Feature: domain Description: ComA-like_MBL-fold Location: 19986-20730 bp Feature: domain Description: ComA-like_MBL-fold Location: 19986-2 0730 bp Feature: gene Location: 21025-22269 bp Feature: domain Description: RMtype1_S_MmaGORF2198P_TRD1-CR1_like Location: 21313-21580 bp Feature: domain Description: RMtype1_S_MmaGORF2 198P_TRD1-CR1_like Location: 2 1313-2 1580 bp Feature: domain Description: RMtype1_S_MmaGORF2198P_TRD1-CR1_like Location: 21694-22120 bp Feature: domain Description: RMtype1_S_MmaGORF2 198P_TRD1-CR1_like Location: 2 1694-2 2 12 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), COG3472 (Uncharacterized protein ), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, ComA-like_MBL-fold (cd07731), RMtype1_S_MmaGORF2198P_TRD1-CR1_like (cd17500)