myRT

myRT report for GCA_010374775.1_ASM1037477v1

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Seq: VLSW01000031.1 Klebsiella pneumoniae strain ATCC 4355 GMPHBIKD_16, whole genome shotgun sequence (138530 bp)
Overview 1 RT 1: 94012-100857 bp Neighborhood of RT #1 [94012, 101114] AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 94012-94317 bp Feature: gene Location: 95200-97476 bp Feature: domain Description: AAA_15 Location: 95233-96241 bp Feature: domain Description: AAA_1 5 Location: 95233-96241 bp Feature: gene Location: 97591-98691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 97771-98305 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 97771 -98305 bp Feature: gene Location: 99347-100465 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 100118-100289 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 001 1 8-1 00289 bp Feature: gene Location: 100638-101114 bp Feature: domain Description: HTH_23 Location: 100716-100857 bp Feature: domain Description: HTH_23 Location: 1 0071 6-1 00857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384)

Seq: VLSW01000046.1 Klebsiella pneumoniae strain ATCC 4355 GMPHBIKD_3, whole genome shotgun sequence (308526 bp)
Overview 1 RT 1: 45449-52618 bp Neighborhood of RT #1 [45449, 52635] EAL RVT-UG4 FimD FimC Feature: gene Location: 45449-45655 bp Feature: gene Location: 45745-46599 bp Feature: domain Description: EAL Location: 46429-46582 bp Feature: domain Description: EAL Location: 4642 9-46582 bp Feature: gene Location: 47236-49266 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47644-48088 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47644-48088 bp Feature: gene Location: 49266-51875 bp Feature: domain Description: FimD Location: 49323-51864 bp Feature: domain Description: FimD Location: 4932 3-51864 bp Feature: gene Location: 51907-52635 bp Feature: domain Description: FimC Location: 51955-52618 bp Feature: domain Description: FimC Location: 51955-52 618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VLSW01000054.1 Klebsiella pneumoniae strain ATCC 4355 GMPHBIKD_44, whole genome shotgun sequence (1913 bp)
Overview 1 RT 1: 2-1463 bp Neighborhood of RT #1 [2, 1855] RVT-GII Feature: gene Location: 2-238 bp Feature: gene Location: 371-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773 -1463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII