myRT

myRT report for GCA_010500925.1_ASM1050092v1

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Seq: QVMG01000011.1 Parabacteroides sp. 52 scaffold11_size163935, whole genome shotgun sequence (163935 bp)
Overview 1 RT 1: 45995-55249 bp Neighborhood of RT #1 [45995, 55249] pfam03781 HRDC RVT-DGRs Feature: gene Location: 45995-47407 bp Feature: domain Description: pfam03781 Location: 46697-47396 bp Feature: domain Description: pfam03781 Location: 46697-47396 bp Feature: gene Location: 47512-47997 bp Feature: domain Description: HRDC Location: 47755-47947 bp Feature: domain Description: HRDC Location: 47755-47947 bp Feature: gene Location: 48015-48998 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48204-48789 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48204-48789 bp Feature: gene Location: 49317-54980 bp Feature: gene Location: 55100-55249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), HRDC (smart00341), RVT-DGRs

Seq: QVMG01000041.1 Parabacteroides sp. 52 scaffold41_size5042, whole genome shotgun sequence (5042 bp)
Overview 1 RT 1: 336-4944 bp Neighborhood of RT #1 [336, 5039] DUF1725 RVT-GII L1-EN Tnp_22_trimer Transposase_22 Tnp_22_dsRBD Feature: gene Location: 336-578 bp Feature: domain Description: DUF1725 Location: 477-531 bp Feature: domain Description: DUF172 5 Location: 477-531 bp Feature: gene Location: 687-1766 bp Feature: gene Location: 1697-3364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2486-3143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 486-3143 bp Feature: gene Location: 3546-4154 bp Feature: domain Description: L1-EN Location: 3576-4140 bp Feature: domain Description: L1-EN Location: 3576-4140 bp Feature: gene Location: 4182-5039 bp Feature: domain Description: Tnp_22_trimer Location: 4317-4443 bp Feature: domain Description: Tnp_2 2 _trimer Location: 4317-4443 bp Feature: domain Description: Transposase_22 Location: 4452-4743 bp Feature: domain Description: Transposase_2 2 Location: 4452 -4743 bp Feature: domain Description: Tnp_22_dsRBD Location: 4752-4944 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 4752 -4944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF1725 (pfam08333), Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)