myRT

myRT report for GCA_010501105.1_ASM1050110v1

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Seq: QVMQ01000048.1 Dysgonomonas sp. 511 scaffold48_size10801, whole genome shotgun sequence (10801 bp)
Overview 1 RT 1: 106-4161 bp Neighborhood of RT #1 [106, 4161] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 106-318 bp Feature: gene Location: 745-3015 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 952-1558 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 952-1 558 bp Feature: domain Description: Cas1_I-II-III Location: 2020-2974 bp Feature: domain Description: Cas1 _I-II-III Location: 2020-2974 bp Feature: gene Location: 3023-3313 bp Feature: domain Description: Cas2_I_II_III Location: 3050-3260 bp Feature: domain Description: Cas2_I_II_III Location: 3050-3260 bp Feature: gene Location: 3961-4161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: QVMQ01000008.1 Dysgonomonas sp. 511 scaffold8_size106615, whole genome shotgun sequence (106615 bp)
Overview 1 RT 1: 77101-83613 bp Neighborhood of RT #1 [77101, 83613] PRK05478 PRK00915 RVT-Retrons DUF4230 Feature: gene Location: 77101-78495 bp Feature: domain Description: PRK05478 Location: 77107-78490 bp Feature: domain Description: PRK05478 Location: 77107-78490 bp Feature: gene Location: 78569-80059 bp Feature: domain Description: PRK00915 Location: 78575-80054 bp Feature: domain Description: PRK00915 Location: 78575-80054 bp Feature: gene Location: 80688-81770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80955-81507 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80955-81507 bp Feature: gene Location: 81898-82518 bp Feature: domain Description: DUF4230 Location: 82057-82477 bp Feature: domain Description: DUF42 30 Location: 82 057-82 477 bp Feature: gene Location: 82879-83613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05478 (3-isopropylmalate dehydratase large subunit), PRK00915 (2-isopropylmalate synthase; Validated), RVT-Retrons, DUF4230 (pfam14014)