myRT

myRT report for GCA_010548565.1_ASM1054856v1

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Seq: JAAGMI010000170.1 Streptomyces griseus strain SID164 contig-6, whole genome shotgun sequence (65628 bp)
Overview 1 RT 1: 24142-38599 bp Neighborhood of RT #1 [24142, 38599] SpvB KOG4659 Rhs_assc_core Laminin_G_3 Laminin_G_3 RVT-GII GIIM HNH Feature: gene Location: 24142-30603 bp Feature: domain Description: SpvB Location: 24847-25600 bp Feature: domain Description: SpvB Location: 24847-25600 bp Feature: domain Description: KOG4659 Location: 27994-28174 bp Feature: domain Description: KOG4659 Location: 27994-281 74 bp Feature: domain Description: Rhs_assc_core Location: 29536-29770 bp Feature: domain Description: Rhs_assc_core Location: 29536-29770 bp Feature: gene Location: 30982-34713 bp Feature: domain Description: Laminin_G_3 Location: 33463-33943 bp Feature: domain Description: Laminin_G_3 Location: 33463-33943 bp Feature: domain Description: Laminin_G_3 Location: 34117-34432 bp Feature: domain Description: Laminin_G_3 Location: 341 1 7-34432 bp Feature: gene Location: 35333-36784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35399-36056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35399-36056 bp Feature: domain Description: GIIM Note: maturase Location: 36107-36341 bp Feature: domain Description: GIIM Note: maturase Location: 361 07-36341 bp Feature: domain Description: HNH Note: nucleases Location: 36662-36764 bp Feature: domain Description: HNH Note: nucleases Location: 36662-36764 bp Feature: gene Location: 37873-38298 bp Feature: gene Location: 38324-38599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpvB (pfam03534), KOG4659 (KOG4659, Uncharacterized conserved protein (Rhs family) ), Rhs_assc_core (TIGR03696), Laminin_G_3 (pfam13385), RVT-GII, GIIM (pfam08388), HNH (pfam01844)