myRT

myRT report for GCA_010592635.1_ASM1059263v1

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Seq: VKVD01000014.1 Escherichia coli strain AS012393 AS012393_14, whole genome shotgun sequence (101752 bp)
Overview 1 RT 1: 8-2841 bp Neighborhood of RT #1 [8, 2841] RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 8-1378 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 269-725 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 269-725 bp Feature: gene Location: 1480-2517 bp Feature: domain Description: HTH_29 Location: 1576-1747 bp Feature: domain Description: HTH_29 Location: 1 576-1 747 bp Feature: domain Description: HTH_33 Location: 1780-1942 bp Feature: domain Description: HTH_33 Location: 1 780-1 942 bp Feature: domain Description: DDE_3 Location: 1984-2413 bp Feature: domain Description: DDE_3 Location: 1 984-241 3 bp Feature: gene Location: 2551-2841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)

Seq: VKVD01001496.1 Escherichia coli strain AS012393 AS012393_1496, whole genome shotgun sequence (213 bp)
Overview 1 RT 1: 1-211 bp Neighborhood of RT #1 [1, 210] RVT-GII Feature: gene Location: 1-210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-2 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VKVD01000024.1 Escherichia coli strain AS012393 AS012393_24, whole genome shotgun sequence (69540 bp)
Overview 1 RT 1: 27-3316 bp Neighborhood of RT #1 [27, 3324] RVT-GII PRK15442 PinE Feature: gene Location: 27-398 bp Feature: gene Location: 692-1585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1574 bp Feature: gene Location: 1724-2584 bp Feature: domain Description: PRK15442 Location: 1733-2582 bp Feature: domain Description: PRK15442 Location: 173 3 -2582 bp Feature: gene Location: 2767-3324 bp Feature: domain Description: PinE Location: 2770-3316 bp Feature: domain Description: PinE Location: 2770-3 3 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK15442 (beta-lactamase TEM; Provisional), PinE (COG1961)