myRT

myRT report for GCA_010598965.1_ASM1059896v1

Download annotations/find similar RTs

Seq: VKZH01000050.1 Klebsiella oxytoca strain AS012243 AS012243_50, whole genome shotgun sequence (41060 bp)
Overview 1 RT 1: 9101-12836 bp Neighborhood of RT #1 [9101, 12844] PHA02517 DEDD_Tnp_IS110 Transposase_20 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 9101-9307 bp Feature: domain Description: PHA02517 Location: 9104-9296 bp Feature: domain Description: PHA0251 7 Location: 91 04-9296 bp Feature: gene Location: 9545-10501 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 9584-9998 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 9584-9998 bp Feature: domain Description: Transposase_20 Location: 10262-10388 bp Feature: domain Description: Transposase_20 Location: 1 0262-1 0388 bp Feature: gene Location: 11043-11798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11151-11280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 51 -1 1 280 bp Feature: domain Description: GIIM Note: maturase Location: 11394-11574 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 394-1 1 574 bp Feature: gene Location: 12099-12509 bp Feature: domain Description: PHA02517 Location: 12105-12444 bp Feature: domain Description: PHA0251 7 Location: 1 21 05-1 2444 bp Feature: gene Location: 12566-12844 bp Feature: domain Description: InsE Location: 12578-12836 bp Feature: domain Description: InsE Location: 1 2578-1 2836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: VKZH01000057.1 Klebsiella oxytoca strain AS012243 AS012243_57, whole genome shotgun sequence (36028 bp)
Overview 1 RT 1: 4060-8911 bp Neighborhood of RT #1 [4060, 8913] TIGR02646 COG3950 RVT-Retrons PRK09692 Feature: gene Location: 4060-4692 bp Feature: domain Description: TIGR02646 Location: 4150-4375 bp Feature: domain Description: TIGR02 646 Location: 4150-4375 bp Feature: gene Location: 4689-6275 bp Feature: domain Description: COG3950 Location: 4869-6084 bp Feature: domain Description: COG3950 Location: 4869-6084 bp Feature: gene Location: 6256-7218 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6364-6961 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6364-6961 bp Feature: gene Location: 7246-7401 bp Feature: gene Location: 7672-8913 bp Feature: domain Description: PRK09692 Location: 7675-8911 bp Feature: domain Description: PRK09692 Location: 7675-8911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK09692 (Integrase; provisional)