myRT

myRT report for GCA_010602475.1_ASM1060247v1

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Seq: VKXO01000016.1 Klebsiella pneumoniae strain AS012306 AS012306_16, whole genome shotgun sequence (114920 bp)
Overview 1 RT 1: 591-7444 bp Neighborhood of RT #1 [591, 7461] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 591-1256 bp Feature: domain Description: INT_P4_C Location: 696-1254 bp Feature: domain Description: INT_P4_C Location: 696-1 254 bp Feature: gene Location: 1517-1957 bp Feature: domain Description: Integrase_1 Location: 1523-1739 bp Feature: domain Description: Integrase_1 Location: 1 523-1 739 bp Feature: gene Location: 2014-4092 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2422-2866 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2422-2866 bp Feature: gene Location: 4092-6701 bp Feature: domain Description: FimD Location: 4149-6690 bp Feature: domain Description: FimD Location: 41 49-6690 bp Feature: gene Location: 6733-7461 bp Feature: domain Description: FimC Location: 6781-7444 bp Feature: domain Description: FimC Location: 6781 -7444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VKXO01000055.1 Klebsiella pneumoniae strain AS012306 AS012306_55, whole genome shotgun sequence (12659 bp)
Overview 1 RT 1: 4924-8634 bp Neighborhood of RT #1 [4924, 8634] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4924-5235 bp Feature: domain Description: InsE Location: 4927-5200 bp Feature: domain Description: InsE Location: 492 7-52 00 bp Feature: gene Location: 5232-5666 bp Feature: domain Description: PHA02517 Location: 5334-5601 bp Feature: domain Description: PHA02 517 Location: 5334-5601 bp Feature: gene Location: 6258-7781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6531-7263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6531-72 63 bp Feature: domain Description: GIIM Note: maturase Location: 7338-7536 bp Feature: domain Description: GIIM Note: maturase Location: 7338-7536 bp Feature: gene Location: 7877-8332 bp Feature: domain Description: PHA02517 Location: 7886-8306 bp Feature: domain Description: PHA02 517 Location: 7886-8306 bp Feature: gene Location: 8395-8634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: VKXO01000076.1 Klebsiella pneumoniae strain AS012306 AS012306_76, whole genome shotgun sequence (1917 bp)
Overview 1 RT 1: 62-1915 bp Neighborhood of RT #1 [62, 1915] RVT-GII Feature: gene Location: 62-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: gene Location: 1703-1915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII