myRT

myRT report for GCA_010608595.1_ASM1060859v1

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Seq: VLVL01000002.1 Stenotrophomonas maltophilia strain AS012603 AS012603_2, whole genome shotgun sequence (192138 bp)
Overview 1 RT 1: 36195-40330 bp Neighborhood of RT #1 [36195, 40344] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 36195-36872 bp Feature: gene Location: 36865-38088 bp Feature: gene Location: 38085-39452 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38445-39141 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38445-391 41 bp Feature: gene Location: 39449-39892 bp Feature: domain Description: Avd_like Location: 39479-39791 bp Feature: domain Description: Avd_like Location: 39479-39791 bp Feature: gene Location: 39919-40344 bp Feature: domain Description: DUF1566 Location: 40072-40330 bp Feature: domain Description: DUF1 566 Location: 40072-40330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: VLVL01000080.1 Stenotrophomonas maltophilia strain AS012603 AS012603_80, whole genome shotgun sequence (18843 bp)
Overview 1 RT 1: 3668-12024 bp Neighborhood of RT #1 [3668, 12041] PRK05659 Triacylglycerol_lipase_like YhjY RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNHc DUF805 Feature: gene Location: 3668-4018 bp Feature: domain Description: PRK05659 Location: 3821-4016 bp Feature: domain Description: PRK05659 Location: 382 1-4016 bp Feature: gene Location: 4075-5910 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 4165-4990 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 4165-4990 bp Feature: domain Description: YhjY Location: 5182-5896 bp Feature: domain Description: YhjY Location: 5182 -5896 bp Feature: gene Location: 7774-9426 bp Feature: RT Description: RVT_N Location: 7825-8068 bp Feature: RT Description: RVT_N Location: 782 5-8068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8113-8734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8113-8734 bp Feature: domain Description: GIIM Note: maturase Location: 8788-9019 bp Feature: domain Description: GIIM Note: maturase Location: 8788-9019 bp Feature: domain Description: HNHc Note: nucleases Location: 9220-9373 bp Feature: domain Description: HNHc Note: nucleases Location: 92 2 0-9373 bp Feature: gene Location: 9558-11210 bp Feature: RT Description: RVT_N Location: 9609-9852 bp Feature: RT Description: RVT_N Location: 9609-9852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9897-10518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9897-10518 bp Feature: domain Description: GIIM Note: maturase Location: 10572-10803 bp Feature: domain Description: GIIM Note: maturase Location: 10572 -10803 bp Feature: domain Description: HNHc Note: nucleases Location: 11004-11157 bp Feature: domain Description: HNHc Note: nucleases Location: 11004-11157 bp Feature: gene Location: 11299-11640 bp Feature: gene Location: 11736-12041 bp Feature: domain Description: DUF805 Location: 11832-12024 bp Feature: domain Description: DUF805 Location: 11832 -12 02 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05659 (sulfur carrier protein ThiS; Validated), Triacylglycerol_lipase_like (cd01847), YhjY (COG5571), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)