myRT

myRT report for GCA_010645065.1_ASM1064506v1

Download annotations/find similar RTs

Seq: JAADZW010000011.1 Flavobacterium fluviatile strain TAPY14 NODE_11_length_153408_cov_196.215762, whole genome shotgun sequence (153408 bp)
Overview 1 RT 1: 68323-76072 bp 2 RT 2: 109007-117134 bp Neighborhood of RT #1 [68323, 76072] DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons HTH_XRE Neighborhood of RT #2 [109007, 117134] YddW anmK RVT-UG3 RVT-UG8 Feature: gene Location: 68323-72966 bp Feature: domain Description: DUF4011 Location: 68371-68866 bp Feature: domain Description: DUF401 1 Location: 68371 -68866 bp Feature: domain Description: DEXXQc_SF1 Location: 69205-69523 bp Feature: domain Description: DEXXQc_SF1 Location: 69205-69523 bp Feature: domain Description: DEXXQc_SF1 Location: 70567-71368 bp Feature: domain Description: DEXXQc_SF1 Location: 70567-71 368 bp Feature: domain Description: TIGR00376 Location: 71509-71896 bp Feature: domain Description: TIGR00376 Location: 71 509-71 896 bp Feature: domain Description: MTES_1575 Location: 72028-72319 bp Feature: domain Description: MTES_1 575 Location: 72028-7231 9 bp Feature: domain Description: DUF3320 Location: 72481-72616 bp Feature: domain Description: DUF3320 Location: 72481 -7261 6 bp Feature: gene Location: 73049-73924 bp Feature: gene Location: 74637-75494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74808-75318 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74808-7531 8 bp Feature: gene Location: 75503-75793 bp Feature: domain Description: HTH_XRE Location: 75515-75677 bp Feature: domain Description: HTH_XRE Location: 7551 5-75677 bp Feature: gene Location: 75836-76072 bp Feature: gene Location: 109007-110578 bp Feature: domain Description: YddW Location: 109073-110228 bp Feature: domain Description: YddW Location: 1 09073-1 1 0228 bp Feature: gene Location: 111044-112252 bp Feature: domain Description: anmK Location: 111095-112235 bp Feature: domain Description: anmK Location: 1 1 1 095-1 1 2235 bp Feature: gene Location: 112502-113995 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 112976-113516 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 1 2976-1 1 351 6 bp Feature: gene Location: 113998-116328 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 114535-115000 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 1 4535-1 1 5000 bp Feature: gene Location: 116685-116906 bp Feature: gene Location: 116991-117134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons, HTH_XRE (smart00530), YddW (COG1649), anmK (PRK09585), RVT-UG3
RVT-UG8

Seq: JAADZW010000009.1 Flavobacterium fluviatile strain TAPY14 NODE_9_length_169623_cov_191.062030, whole genome shotgun sequence (169623 bp)
Overview 1 RT 1: 155507-159615 bp Neighborhood of RT #1 [155507, 159615] PRK09225 RVT-UG7 Feature: gene Location: 155507-156796 bp Feature: domain Description: PRK09225 Location: 155510-156791 bp Feature: domain Description: PRK092 2 5 Location: 155510-156791 bp Feature: gene Location: 156970-157320 bp Feature: gene Location: 157615-158565 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 157618-157774 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 157618-157774 bp Feature: gene Location: 158562-159290 bp Feature: gene Location: 159427-159615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09225 (threonine synthase; Validated), RVT-UG7