myRT

myRT report for GCA_010668315.1_ASM1066831v1

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Seq: WXXO01000019.1 Rhizobium leguminosarum strain JHI1259 JHI1259_NODE_19_length_126233_cov_42.115, whole genome shotgun sequence (126233 bp)
Overview 1 RT 1: 5933-13296 bp Neighborhood of RT #1 [5933, 13334] YbjD YbjD PLDc_unchar6 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 5933-7762 bp Feature: domain Description: YbjD Location: 5936-6266 bp Feature: domain Description: YbjD Location: 5936-6266 bp Feature: domain Description: YbjD Location: 6758-7031 bp Feature: domain Description: YbjD Location: 6758-7031 bp Feature: gene Location: 8065-9264 bp Feature: domain Description: PLDc_unchar6 Location: 8713-9088 bp Feature: domain Description: PLDc_unchar6 Location: 871 3-9088 bp Feature: gene Location: 9406-11229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10144-10834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 44-1 0834 bp Feature: gene Location: 11339-12928 bp Feature: domain Description: LZ_Tnp_IS66 Location: 11456-11684 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 1 456-1 1 684 bp Feature: domain Description: zf-IS66 Location: 11711-11837 bp Feature: domain Description: zf-IS66 Location: 1 1 71 1 -1 1 837 bp Feature: domain Description: DDE_Tnp_IS66 Location: 11900-12767 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 900-1 2767 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12788-12899 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 2788-1 2899 bp Feature: gene Location: 12981-13334 bp Feature: domain Description: TnpB_IS66 Location: 13008-13296 bp Feature: domain Description: TnpB_IS66 Location: 1 3008-1 3296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), YbjD (COG3593), PLDc_unchar6 (cd09176), RVT-GII