myRT

myRT report for GCA_010668605.1_ASM1066860v1

Download annotations/find similar RTs

Seq: WXXP01000044.1 Rhizobium leguminosarum strain JHI944 JHI944_NODE_44_length_10479_cov_127.99, whole genome shotgun sequence (10479 bp)
Overview 1 RT 1: 5395-9261 bp Neighborhood of RT #1 [5395, 9329] INT_IntI_C DDE_Tnp_1 RVT-GII DDE_3 RolB_RolC Feature: gene Location: 5395-5898 bp Feature: domain Description: INT_IntI_C Location: 5530-5821 bp Feature: domain Description: INT_IntI_C Location: 5530-5821 bp Feature: gene Location: 6228-6815 bp Feature: domain Description: DDE_Tnp_1 Location: 6321-6780 bp Feature: domain Description: DDE_Tnp_1 Location: 6321 -6780 bp Feature: gene Location: 7212-7772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7356-7671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7356-7671 bp Feature: gene Location: 8324-8545 bp Feature: domain Description: DDE_3 Location: 8336-8453 bp Feature: domain Description: DDE_3 Location: 8336-8453 bp Feature: gene Location: 8868-9329 bp Feature: domain Description: RolB_RolC Location: 8973-9261 bp Feature: domain Description: RolB_RolC Location: 8973-9261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_IntI_C (cd01193), DDE_Tnp_1 (pfam01609), RVT-GII, DDE_3 (pfam13358), RolB_RolC (pfam02027)

Seq: WXXP01000545.1 Rhizobium leguminosarum strain JHI944 JHI944_NODE_547_length_511_cov_1.10417, whole genome shotgun sequence (511 bp)
Overview 1 RT 1: 2-125 bp Neighborhood of RT #1 [2, 508] RVT-AbiP2 Feature: gene Location: 2-508 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5-125 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5-12 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2