myRT

myRT report for GCA_010671665.1_ASM1067166v1

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Seq: JAAGPA010000037.1 Bacillus megaterium NBRC 15308 = ATCC 14581 strain NBRC 15308 tig00000001_np1212, whole genome shotgun sequence (5324218 bp)
Overview 1 RT 1: 2947774-2954927 bp Neighborhood of RT #1 [2947774, 2955112] GAT1_cyanophycinase GAT1_cyanophycinase RocR RVT-GII RVT-GII Intron_maturas2 KOG4768 RocR Feature: gene Location: 2947774-2950326 bp Feature: domain Description: GAT1_cyanophycinase Location: 2947885-2948662 bp Feature: domain Description: GAT1 _cyanophycinase Location: 2947885-2948662 bp Feature: domain Description: GAT1_cyanophycinase Location: 2949166-2949916 bp Feature: domain Description: GAT1 _cyanophycinase Location: 29491 66-294991 6 bp Feature: gene Location: 2950539-2951912 bp Feature: domain Description: RocR Location: 2951130-2951853 bp Feature: domain Description: RocR Location: 2951 1 30-2951 853 bp Feature: gene Location: 2952462-2953235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952726-2953164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952726-29531 64 bp Feature: gene Location: 2953314-2953919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2953359-2953554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2953359-2953554 bp Feature: domain Description: Intron_maturas2 Location: 2953632-2953902 bp Feature: domain Description: Intron_maturas2 Location: 2953632-2953902 bp Feature: gene Location: 2953923-2954276 bp Feature: domain Description: KOG4768 Location: 2954055-2954271 bp Feature: domain Description: KOG4768 Location: 2954055-2954271 bp Feature: gene Location: 2954417-2955112 bp Feature: domain Description: RocR Location: 2954423-2954927 bp Feature: domain Description: RocR Location: 2954423-2954927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAT1_cyanophycinase (cd03145), RocR (COG3829), RVT-GII, Intron_maturas2 (pfam01348), KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: JAAGPA010000044.1 Bacillus megaterium NBRC 15308 = ATCC 14581 strain NBRC 15308 tig00000035_np1212, whole genome shotgun sequence (338118 bp)
Overview 1 RT 1: 27332-31000 bp 2 RT 2: 261808-267127 bp 3 RT 3: 328252-332263 bp Neighborhood of RT #1 [27332, 31000] PadR RVT_N RVT-GII GIIM Neighborhood of RT #2 [261808, 267186] TraG-D_C RVT-GII Intron_maturas2 HNHc TraG_VirD4 TraG_VirD4 Neighborhood of RT #3 [328252, 332263] DUF2812 PadR RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 27332-27667 bp Feature: domain Description: PadR Location: 27383-27641 bp Feature: domain Description: PadR Location: 2 7383-2 7641 bp Feature: gene Location: 27776-27979 bp Feature: gene Location: 28388-29608 bp Feature: domain Description: RVT_N Location: 28472-28718 bp Feature: domain Description: RVT_N Location: 2 8472 -2 8718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28772-29432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8772 -2 9432 bp Feature: domain Description: GIIM Note: maturase Location: 29501-29606 bp Feature: domain Description: GIIM Note: maturase Location: 2 9501-2 9606 bp Feature: gene Location: 29642-30073 bp Feature: gene Location: 30782-31000 bp Feature: gene Location: 261808-262014 bp Feature: gene Location: 262040-262948 bp Feature: domain Description: TraG-D_C Location: 262049-262361 bp Feature: domain Description: TraG-D_C Location: 2 62 049-2 62 361 bp Feature: gene Location: 263055-264869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263319-264147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 63319-2 64147 bp Feature: domain Description: Intron_maturas2 Location: 264225-264570 bp Feature: domain Description: Intron_maturas2 Location: 2 642 2 5-2 64570 bp Feature: domain Description: HNHc Note: nucleases Location: 264666-264840 bp Feature: domain Description: HNHc Note: nucleases Location: 2 64666-2 64840 bp Feature: gene Location: 264875-265024 bp Feature: gene Location: 265420-267186 bp Feature: domain Description: TraG_VirD4 Location: 265975-266653 bp Feature: domain Description: TraG_VirD4 Location: 2 65975-2 66653 bp Feature: domain Description: TraG_VirD4 Location: 266965-267127 bp Feature: domain Description: TraG_VirD4 Location: 2 66965-2 6712 7 bp Feature: gene Location: 328252-328437 bp Feature: domain Description: DUF2812 Location: 328258-328426 bp Feature: domain Description: DUF2 812 Location: 32 82 58-32 842 6 bp Feature: gene Location: 328701-328934 bp Feature: domain Description: PadR Location: 328752-328926 bp Feature: domain Description: PadR Location: 32 8752 -32 892 6 bp Feature: gene Location: 329657-330232 bp Feature: domain Description: RVT_N Location: 329741-329987 bp Feature: domain Description: RVT_N Location: 32 9741-32 9987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330041-330224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330041-3302 2 4 bp Feature: gene Location: 330246-330932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330252-330702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3302 52 -330702 bp Feature: domain Description: GIIM Note: maturase Location: 330771-330909 bp Feature: domain Description: GIIM Note: maturase Location: 330771-330909 bp Feature: gene Location: 331073-331342 bp Feature: gene Location: 332045-332263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), HNHc (smart00507), TraG_VirD4, DUF2812 (pfam11193)

Seq: JAAGPA010000034.1 Bacillus megaterium NBRC 15308 = ATCC 14581 strain NBRC 15308 tig00000037_np1212, whole genome shotgun sequence (156474 bp)
Overview 1 RT 1: 22255-25145 bp 2 RT 2: 49712-54249 bp 3 RT 3: 66720-70546 bp 4 RT 4: 94419-99244 bp Neighborhood of RT #1 [22255, 25145] RVT_N RVT-GII Neighborhood of RT #2 [49712, 54254] HxlR Acetyltransf_1 RVT_N RVT-GII RVT-GII MFS_MefA_like Neighborhood of RT #3 [66720, 70546] ComEC RVT-GII KOG4768 Neighborhood of RT #4 [94419, 99249] RVT_N RVT-GII RVT-GII PinE Feature: gene Location: 22255-22497 bp Feature: gene Location: 22511-22693 bp Feature: gene Location: 23101-24231 bp Feature: domain Description: RVT_N Location: 23185-23431 bp Feature: domain Description: RVT_N Location: 23 185-23 43 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23485-24145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 485-24145 bp Feature: gene Location: 24352-24783 bp Feature: gene Location: 24981-25145 bp Feature: gene Location: 49712-50044 bp Feature: domain Description: HxlR Location: 49748-50036 bp Feature: domain Description: HxlR Location: 49748-5003 6 bp Feature: gene Location: 50588-50983 bp Feature: domain Description: Acetyltransf_1 Location: 50606-50873 bp Feature: domain Description: Acetyltransf_1 Location: 50606-50873 bp Feature: gene Location: 51614-52387 bp Feature: domain Description: RVT_N Location: 51698-51944 bp Feature: domain Description: RVT_N Location: 51698-51944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51998-52382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51998-523 82 bp Feature: gene Location: 52408-52743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52459-52657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52459-52657 bp Feature: gene Location: 52865-53296 bp Feature: gene Location: 53808-54254 bp Feature: domain Description: MFS_MefA_like Location: 53856-54249 bp Feature: domain Description: MFS_MefA_like Location: 53 856-54249 bp Feature: gene Location: 66720-67064 bp Feature: domain Description: ComEC Location: 66723-67050 bp Feature: domain Description: ComEC Location: 66723 -67050 bp Feature: gene Location: 67561-67941 bp Feature: gene Location: 67929-69443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67989-69078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67989-69078 bp Feature: domain Description: KOG4768 Location: 69222-69417 bp Feature: domain Description: KOG4768 Location: 69222-69417 bp Feature: gene Location: 69461-69658 bp Feature: gene Location: 70412-70546 bp Feature: gene Location: 94419-94580 bp Feature: gene Location: 94618-95205 bp Feature: gene Location: 96224-96982 bp Feature: domain Description: RVT_N Location: 96308-96554 bp Feature: domain Description: RVT_N Location: 963 08-96554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96608-96875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96608-96875 bp Feature: gene Location: 97017-97352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97068-97266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97068-97266 bp Feature: gene Location: 97519-97905 bp Feature: gene Location: 98905-99249 bp Feature: domain Description: PinE Location: 98911-99244 bp Feature: domain Description: PinE Location: 98911-99244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HxlR (pfam01638), Acetyltransf_1 (pfam00583), MFS_MefA_like (cd06173), ComEC (COG2333), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), PinE (COG1961)

Seq: JAAGPA010000015.1 Bacillus megaterium NBRC 15308 = ATCC 14581 strain NBRC 15308 tig00000059_np1212, whole genome shotgun sequence (36348 bp)
Overview 1 RT 1: 3825-9250 bp Neighborhood of RT #1 [3825, 9250] PRK12444 PRK12444 RVT_N RVT-GII RVT-GII Feature: gene Location: 3825-4175 bp Feature: domain Description: PRK12444 Location: 3828-4152 bp Feature: domain Description: PRK124 4 4 Location: 3828-4 152 bp Feature: gene Location: 4565-5071 bp Feature: domain Description: PRK12444 Location: 4568-5066 bp Feature: domain Description: PRK124 4 4 Location: 4 568-5066 bp Feature: gene Location: 6516-7112 bp Feature: domain Description: RVT_N Location: 6600-6846 bp Feature: domain Description: RVT_N Location: 6600-684 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6900-7101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6900-7101 bp Feature: gene Location: 7311-7601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7320-7563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7320-7563 bp Feature: gene Location: 7716-8198 bp Feature: gene Location: 9119-9250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12444 (threonyl-tRNA synthetase; Reviewed), RVT_N (pfam13655), RVT-GII

Seq: JAAGPA010000003.1 Bacillus megaterium NBRC 15308 = ATCC 14581 strain NBRC 15308 tig00000119_np1212, whole genome shotgun sequence (11644 bp)
Overview 1 RT 1: 3256-6541 bp Neighborhood of RT #1 [3256, 6546] Spr KOG4768 RVT-GII KOG4768 CwlT_like Feature: gene Location: 3256-3594 bp Feature: domain Description: Spr Location: 3328-3577 bp Feature: domain Description: Spr Location: 3328-35 77 bp Feature: gene Location: 3720-4361 bp Feature: domain Description: KOG4768 Location: 3741-4353 bp Feature: domain Description: KOG4768 Location: 3741-435 3 bp Feature: gene Location: 4382-5203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4388-5141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4388-5 141 bp Feature: gene Location: 5226-5540 bp Feature: domain Description: KOG4768 Location: 5271-5463 bp Feature: domain Description: KOG4768 Location: 5 271-5 463 bp Feature: gene Location: 6193-6546 bp Feature: domain Description: CwlT_like Location: 6202-6541 bp Feature: domain Description: CwlT_like Location: 6202-65 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, CwlT_like

Seq: JAAGPA010000008.1 Bacillus megaterium NBRC 15308 = ATCC 14581 strain NBRC 15308 tig00000121_np1212, whole genome shotgun sequence (24452 bp)
Overview 1 RT 1: 1417-5840 bp Neighborhood of RT #1 [1417, 5840] GIIM RVT-GII RVT-GII MGT Feature: gene Location: 1417-1590 bp Feature: gene Location: 1712-1855 bp Feature: domain Description: GIIM Note: maturase Location: 1721-1808 bp Feature: domain Description: GIIM Note: maturase Location: 1721-1808 bp Feature: gene Location: 1872-2063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1881-1977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1881-1977 bp Feature: gene Location: 2166-2306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2172-2274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2172-2274 bp Feature: gene Location: 4275-4640 bp Feature: domain Description: MGT Location: 4413-4623 bp Feature: domain Description: MGT Location: 4413-46 23 bp Feature: gene Location: 5436-5840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, MGT (TIGR01426)