myRT

myRT report for GCA_010671765.1_ASM1067176v1

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Seq: JAAHBW010000021.1 Micromonospora sp. PPF5-17B, whole genome shotgun sequence (104129 bp)
Overview 1 RT 1: 97747-103798 bp Neighborhood of RT #1 [97747, 104127] PRK07823 PRK00228 RVT-GII RHS_repeat RhsA YD_repeat_2x YD_repeat_2x Rhs_assc_core Feature: gene Location: 97747-98922 bp Feature: domain Description: PRK07823 Location: 98131-98920 bp Feature: domain Description: PRK07823 Location: 981 31 -98920 bp Feature: gene Location: 98704-99294 bp Feature: domain Description: PRK00228 Location: 98746-99277 bp Feature: domain Description: PRK00228 Location: 98746-99277 bp Feature: gene Location: 99885-100397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100101-100206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 001 01 -1 00206 bp Feature: gene Location: 101373-101603 bp Feature: gene Location: 101632-104127 bp Feature: domain Description: RHS_repeat Location: 102325-102421 bp Feature: domain Description: RHS_repeat Location: 1 02325-1 02421 bp Feature: domain Description: RhsA Location: 102523-102667 bp Feature: domain Description: RhsA Location: 1 02523-1 02667 bp Feature: domain Description: YD_repeat_2x Location: 102679-102775 bp Feature: domain Description: YD_repeat_2x Location: 1 02679-1 02775 bp Feature: domain Description: YD_repeat_2x Location: 102937-102982 bp Feature: domain Description: YD_repeat_2x Location: 1 02937-1 02982 bp Feature: domain Description: Rhs_assc_core Location: 103573-103798 bp Feature: domain Description: Rhs_assc_core Location: 1 03573-1 03798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RHS_repeat (pfam05593), RhsA (COG3209), YD_repeat_2x (TIGR01643), Rhs_assc_core (TIGR03696), PRK07823 (S-methyl-5'-thioadenosine phosphorylase), PRK00228 (YqgE/AlgH family protein), RVT-GII