myRT

myRT report for GCA_010671795.1_ASM1067179v1

Download annotations/find similar RTs

Seq: JAAHBY010000077.1 Micromonospora sp. PPF5-17, whole genome shotgun sequence (26925 bp)
Overview 1 RT 1: 3-6381 bp Neighborhood of RT #1 [3, 6383] RHS_repeat RhsA YD_repeat_2x YD_repeat_2x Rhs_assc_core RVT-GII PRK00228 PRK07823 Feature: gene Location: 3-2498 bp Feature: domain Description: RHS_repeat Location: 696-792 bp Feature: domain Description: RHS_repeat Location: 696-792 bp Feature: domain Description: RhsA Location: 894-1038 bp Feature: domain Description: RhsA Location: 894-1 038 bp Feature: domain Description: YD_repeat_2x Location: 1050-1146 bp Feature: domain Description: YD_repeat_2x Location: 1 050-1 1 46 bp Feature: domain Description: YD_repeat_2x Location: 1308-1353 bp Feature: domain Description: YD_repeat_2x Location: 1 308-1 353 bp Feature: domain Description: Rhs_assc_core Location: 1944-2169 bp Feature: domain Description: Rhs_assc_core Location: 1 944-21 69 bp Feature: gene Location: 3733-4245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3949-4054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3949-4054 bp Feature: gene Location: 4836-5426 bp Feature: domain Description: PRK00228 Location: 4878-5409 bp Feature: domain Description: PRK00228 Location: 4878-5409 bp Feature: gene Location: 5580-6383 bp Feature: domain Description: PRK07823 Location: 5592-6381 bp Feature: domain Description: PRK07823 Location: 5592-6381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RHS_repeat (pfam05593), RhsA (COG3209), YD_repeat_2x (TIGR01643), Rhs_assc_core (TIGR03696), RVT-GII, PRK00228 (YqgE/AlgH family protein), PRK07823 (S-methyl-5'-thioadenosine phosphorylase)