myRT

myRT report for GCA_010671925.1_ASM1067192v1

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Seq: JAAHIH010000001.1 Moorea sp. SIOASIH ASIH_NODE_1, whole genome shotgun sequence (1717335 bp)
Overview 1 RT 1: 525410-528330 bp 2 RT 2: 617603-621264 bp 3 RT 3: 845651-855005 bp 4 RT 4: 949272-954463 bp 5 RT 5: 1118737-1125493 bp 6 RT 6: 1498449-1504079 bp 7 RT 7: 1523400-1528734 bp Neighborhood of RT #1 [525410, 528335] RVT_N RVT-GII RVT-GII GIIM McrA InsQ Neighborhood of RT #2 [617603, 621305] RVT_N RVT-GII GIIM HNHc PRK10005 Neighborhood of RT #3 [845651, 855037] Adi1 RLP_DK-MTP-1-P-enolase RVT_N RVT-GII RVT-GII GIIM McrA HAD_Pase RVT_N RVT-GII RVT-GII GIIM McrA RRXRR HNH_5 salvage_mtnB Neighborhood of RT #4 [949272, 954486] NdhS RVT_N RVT-GII RVT-GII GIIM McrA FtsW PRK11670 Neighborhood of RT #5 [1118737, 1125579] InsQ RVT_N RVT-GII GIIM HNHc InsQ Neighborhood of RT #6 [1498449, 1504246] COG5526 Peptidase_M15_3 DadA RVT_N RVT-GII RVT-GII GIIM McrA OrfB_IS605 Neighborhood of RT #7 [1523400, 1528751] MnuA_DNase1-like RVT-GII GIIM McrA RVT_N RVT-GII InsQ InsQ Feature: gene Location: 525410-525613 bp Feature: gene Location: 525669-525896 bp Feature: gene Location: 525951-527465 bp Feature: domain Description: RVT_N Location: 525978-526224 bp Feature: domain Description: RVT_N Location: 525978-526224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526275-526695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526275-526695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526704-526869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526704-526869 bp Feature: domain Description: GIIM Note: maturase Location: 526926-527115 bp Feature: domain Description: GIIM Note: maturase Location: 526926-5271 1 5 bp Feature: domain Description: McrA Location: 527118-527424 bp Feature: domain Description: McrA Location: 5271 1 8-527424 bp Feature: gene Location: 527689-527943 bp Feature: gene Location: 528027-528335 bp Feature: domain Description: InsQ Location: 528036-528330 bp Feature: domain Description: InsQ Location: 528036-528330 bp Feature: gene Location: 617603-617785 bp Feature: gene Location: 618150-618698 bp Feature: gene Location: 618799-619836 bp Feature: domain Description: RVT_N Location: 618862-619108 bp Feature: domain Description: RVT_N Location: 61 8862-61 91 08 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 619156-619780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 91 56-61 9780 bp Feature: gene Location: 619925-620617 bp Feature: domain Description: GIIM Note: maturase Location: 619943-620129 bp Feature: domain Description: GIIM Note: maturase Location: 61 9943-6201 29 bp Feature: domain Description: HNHc Note: nucleases Location: 620339-620504 bp Feature: domain Description: HNHc Note: nucleases Location: 620339-620504 bp Feature: gene Location: 620691-621305 bp Feature: domain Description: PRK10005 Location: 620697-621264 bp Feature: domain Description: PRK1 0005 Location: 620697-621 264 bp Feature: gene Location: 845651-846208 bp Feature: domain Description: Adi1 Location: 845657-846185 bp Feature: domain Description: Adi1 Location: 845657-8461 85 bp Feature: gene Location: 846237-847322 bp Feature: domain Description: RLP_DK-MTP-1-P-enolase Location: 846246-847317 bp Feature: domain Description: RLP_DK-MTP-1 -P-enolase Location: 846246-84731 7 bp Feature: gene Location: 847568-849082 bp Feature: domain Description: RVT_N Location: 847595-847841 bp Feature: domain Description: RVT_N Location: 847595-847841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847892-848315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847892-84831 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848321-848486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848321 -848486 bp Feature: domain Description: GIIM Note: maturase Location: 848543-848711 bp Feature: domain Description: GIIM Note: maturase Location: 848543-84871 1 bp Feature: domain Description: McrA Location: 848744-849044 bp Feature: domain Description: McrA Location: 848744-849044 bp Feature: gene Location: 848971-849213 bp Feature: gene Location: 849695-849826 bp Feature: gene Location: 849965-850435 bp Feature: domain Description: HAD_Pase Location: 849971-850364 bp Feature: domain Description: HAD_Pase Location: 849971 -850364 bp Feature: gene Location: 850690-850818 bp Feature: gene Location: 851172-851972 bp Feature: domain Description: RVT_N Location: 851265-851511 bp Feature: domain Description: RVT_N Location: 851 265-851 51 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851562-851949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851 562-851 949 bp Feature: gene Location: 852028-852768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852034-852172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852034-8521 72 bp Feature: domain Description: GIIM Note: maturase Location: 852229-852433 bp Feature: domain Description: GIIM Note: maturase Location: 852229-852433 bp Feature: domain Description: McrA Location: 852457-852727 bp Feature: domain Description: McrA Location: 852457-852727 bp Feature: gene Location: 852920-854203 bp Feature: domain Description: RRXRR Location: 852929-853457 bp Feature: domain Description: RRXRR Location: 852929-853457 bp Feature: domain Description: HNH_5 Location: 853514-853667 bp Feature: domain Description: HNH_5 Location: 85351 4-853667 bp Feature: gene Location: 854354-855037 bp Feature: domain Description: salvage_mtnB Location: 854426-855005 bp Feature: domain Description: salvage_mtnB Location: 854426-855005 bp Feature: gene Location: 949272-949463 bp Feature: domain Description: NdhS Location: 949278-949431 bp Feature: domain Description: NdhS Location: 949278-949431 bp Feature: gene Location: 949748-949897 bp Feature: gene Location: 950201-951736 bp Feature: domain Description: RVT_N Location: 950249-950495 bp Feature: domain Description: RVT_N Location: 950249-950495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950546-950966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950546-950966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950975-951140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950975-951 1 40 bp Feature: domain Description: GIIM Note: maturase Location: 951197-951365 bp Feature: domain Description: GIIM Note: maturase Location: 951 1 97-951 365 bp Feature: domain Description: McrA Location: 951395-951695 bp Feature: domain Description: McrA Location: 951 395-951 695 bp Feature: gene Location: 951948-953216 bp Feature: domain Description: FtsW Location: 952008-953205 bp Feature: domain Description: FtsW Location: 952008-953205 bp Feature: gene Location: 953422-954486 bp Feature: domain Description: PRK11670 Location: 953437-954463 bp Feature: domain Description: PRK1 1 670 Location: 953437-954463 bp Feature: gene Location: 1118737-1118895 bp Feature: gene Location: 1119341-1120750 bp Feature: domain Description: InsQ Location: 1119557-1120628 bp Feature: domain Description: InsQ Location: 1 1 1 9557-1 1 20628 bp Feature: gene Location: 1120838-1122673 bp Feature: domain Description: RVT_N Location: 1120901-1121147 bp Feature: domain Description: RVT_N Location: 1 1 20901 -1 1 21 1 47 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1121195-1121867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 21 1 95-1 1 21 867 bp Feature: domain Description: GIIM Note: maturase Location: 1121939-1122173 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 21 939-1 1 221 73 bp Feature: domain Description: HNHc Note: nucleases Location: 1122380-1122533 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 22380-1 1 22533 bp Feature: gene Location: 1123963-1124355 bp Feature: gene Location: 1124398-1125579 bp Feature: domain Description: InsQ Location: 1124404-1125493 bp Feature: domain Description: InsQ Location: 1 1 24404-1 1 25493 bp Feature: gene Location: 1498449-1500089 bp Feature: domain Description: COG5526 Location: 1498464-1498926 bp Feature: domain Description: COG5526 Location: 1 498464-1 498926 bp Feature: domain Description: Peptidase_M15_3 Location: 1499745-1500051 bp Feature: domain Description: Peptidase_M1 5_3 Location: 1 499745-1 500051 bp Feature: gene Location: 1500495-1500818 bp Feature: domain Description: DadA Location: 1500525-1500741 bp Feature: domain Description: DadA Location: 1 500525-1 500741 bp Feature: gene Location: 1500959-1502488 bp Feature: domain Description: RVT_N Location: 1500980-1501226 bp Feature: domain Description: RVT_N Location: 1 500980-1 501 226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1501277-1501700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 501 277-1 501 700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1501703-1501871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 501 703-1 501 871 bp Feature: domain Description: GIIM Note: maturase Location: 1501928-1502108 bp Feature: domain Description: GIIM Note: maturase Location: 1 501 928-1 5021 08 bp Feature: domain Description: McrA Location: 1502123-1502429 bp Feature: domain Description: McrA Location: 1 5021 23-1 502429 bp Feature: gene Location: 1503033-1503188 bp Feature: gene Location: 1503227-1504246 bp Feature: domain Description: OrfB_IS605 Location: 1503740-1504079 bp Feature: domain Description: OrfB_IS605 Location: 1 503740-1 504079 bp Feature: gene Location: 1523400-1524581 bp Feature: domain Description: MnuA_DNase1-like Location: 1523505-1524567 bp Feature: domain Description: MnuA_DNase1 -like Location: 1 523505-1 524567 bp Feature: gene Location: 1525272-1525469 bp Feature: gene Location: 1525524-1526267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1525527-1525671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 525527-1 525671 bp Feature: domain Description: GIIM Note: maturase Location: 1525728-1525908 bp Feature: domain Description: GIIM Note: maturase Location: 1 525728-1 525908 bp Feature: domain Description: McrA Location: 1525929-1526229 bp Feature: domain Description: McrA Location: 1 525929-1 526229 bp Feature: gene Location: 1526311-1527048 bp Feature: domain Description: RVT_N Location: 1526347-1526593 bp Feature: domain Description: RVT_N Location: 1 526347-1 526593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1526644-1527025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 526644-1 527025 bp Feature: gene Location: 1527575-1527859 bp Feature: domain Description: InsQ Location: 1527581-1527842 bp Feature: domain Description: InsQ Location: 1 527581 -1 527842 bp Feature: gene Location: 1527957-1528751 bp Feature: domain Description: InsQ Location: 1527960-1528734 bp Feature: domain Description: InsQ Location: 1 527960-1 528734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675), HNHc (smart00507), PRK10005 (dihydroxyacetone kinase ADP-binding subunit DhaL), Adi1 (COG1791), RLP_DK-MTP-1-P-enolase (cd08209), HAD_Pase (cd16418)
RRXRR (pfam14239), HNH_5 (pfam14279), salvage_mtnB (TIGR03328), NdhS (pfam11623), FtsW (COG0772), PRK11670 (iron-sulfur cluster carrier protein ApbC), COG5526 (Lysozyme family protein ), Peptidase_M15_3 (pfam08291), DadA (COG0665), OrfB_IS605 (pfam01385)
MnuA_DNase1-like (cd10283)

Seq: JAAHIH010000013.1 Moorea sp. SIOASIH ASIH_NODE_13, whole genome shotgun sequence (83226 bp)
Overview 1 RT 1: 28194-32525 bp Neighborhood of RT #1 [28194, 32599] RVT_N RVT-GII GIIM HNHc InsQ Feature: gene Location: 28194-28367 bp Feature: gene Location: 28680-29285 bp Feature: gene Location: 29386-30423 bp Feature: domain Description: RVT_N Location: 29449-29695 bp Feature: domain Description: RVT_N Location: 2 9449-2 9695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29743-30367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9743-30367 bp Feature: gene Location: 30512-31204 bp Feature: domain Description: GIIM Note: maturase Location: 30530-30716 bp Feature: domain Description: GIIM Note: maturase Location: 30530-30716 bp Feature: domain Description: HNHc Note: nucleases Location: 30926-31091 bp Feature: domain Description: HNHc Note: nucleases Location: 3092 6-31091 bp Feature: gene Location: 31310-32599 bp Feature: domain Description: InsQ Location: 31370-32525 bp Feature: domain Description: InsQ Location: 31370-32 52 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHIH010000002.1 Moorea sp. SIOASIH ASIH_NODE_2, whole genome shotgun sequence (1693677 bp)
Overview 1 RT 1: 16084-20466 bp 2 RT 2: 404343-410666 bp 3 RT 3: 955259-961398 bp 4 RT 4: 1635418-1640254 bp Neighborhood of RT #1 [16084, 20642] InsQ InsQ RVT_N RVT-GII RVT-GII GIIM McrA YjbI HicB Neighborhood of RT #2 [404343, 410666] HTH_OrfB_IS605 InsQ RVT_N RVT-GII RVT-GII GIIM McrA RRXRR HNH_5 Neighborhood of RT #3 [955259, 961409] YadD McrA RVT-UNC RVT_N RVT-GII PDDEXK_2 DUF4351 RecQ Neighborhood of RT #4 [1635418, 1640254] RVT_N RVT-GII RVT-GII GIIM McrA tspaseT_teng_C Feature: gene Location: 16084-16857 bp Feature: domain Description: InsQ Location: 16096-16834 bp Feature: domain Description: InsQ Location: 16096-1683 4 bp Feature: gene Location: 16972-17307 bp Feature: domain Description: InsQ Location: 16978-17248 bp Feature: domain Description: InsQ Location: 16978-17248 bp Feature: gene Location: 17863-19374 bp Feature: domain Description: RVT_N Location: 17890-18136 bp Feature: domain Description: RVT_N Location: 17890-1813 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18187-18610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18187-18610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18619-18781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18619-18781 bp Feature: domain Description: GIIM Note: maturase Location: 18838-19024 bp Feature: domain Description: GIIM Note: maturase Location: 1883 8-19024 bp Feature: domain Description: McrA Location: 19036-19339 bp Feature: domain Description: McrA Location: 1903 6-193 3 9 bp Feature: gene Location: 19709-20242 bp Feature: domain Description: YjbI Location: 19757-20003 bp Feature: domain Description: YjbI Location: 19757-20003 bp Feature: gene Location: 20334-20642 bp Feature: domain Description: HicB Location: 20337-20466 bp Feature: domain Description: HicB Location: 203 3 7-20466 bp Feature: gene Location: 404343-405929 bp Feature: domain Description: HTH_OrfB_IS605 Location: 404820-404916 bp Feature: domain Description: HTH_OrfB_IS605 Location: 404820-404916 bp Feature: domain Description: InsQ Location: 404988-405894 bp Feature: domain Description: InsQ Location: 404988-405894 bp Feature: gene Location: 406733-406861 bp Feature: gene Location: 407215-408015 bp Feature: domain Description: RVT_N Location: 407308-407554 bp Feature: domain Description: RVT_N Location: 4073 08-407554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407605-407992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407605-407992 bp Feature: gene Location: 408071-408811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408077-408215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408077-408215 bp Feature: domain Description: GIIM Note: maturase Location: 408272-408476 bp Feature: domain Description: GIIM Note: maturase Location: 408272-408476 bp Feature: domain Description: McrA Location: 408500-408770 bp Feature: domain Description: McrA Location: 408500-408770 bp Feature: gene Location: 408988-410274 bp Feature: domain Description: RRXRR Location: 408997-409525 bp Feature: domain Description: RRXRR Location: 408997-409525 bp Feature: domain Description: HNH_5 Location: 409582-409735 bp Feature: domain Description: HNH_5 Location: 409582-40973 5 bp Feature: gene Location: 410448-410666 bp Feature: gene Location: 955259-956137 bp Feature: domain Description: YadD Location: 955340-956024 bp Feature: domain Description: YadD Location: 9553 40-956024 bp Feature: gene Location: 956259-956681 bp Feature: domain Description: McrA Location: 956334-956643 bp Feature: domain Description: McrA Location: 9563 3 4-956643 bp Feature: gene Location: 956967-957107 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 956970-957105 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 956970-957105 bp Feature: gene Location: 957139-958020 bp Feature: domain Description: RVT_N Location: 957298-957544 bp Feature: domain Description: RVT_N Location: 957298-957544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957595-957976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957595-957976 bp Feature: gene Location: 958711-959685 bp Feature: domain Description: PDDEXK_2 Location: 958729-959407 bp Feature: domain Description: PDDEXK_2 Location: 958729-959407 bp Feature: domain Description: DUF4351 Location: 959497-959668 bp Feature: domain Description: DUF43 51 Location: 959497-959668 bp Feature: gene Location: 959901-961409 bp Feature: domain Description: RecQ Location: 959979-961398 bp Feature: domain Description: RecQ Location: 959979-9613 98 bp Feature: gene Location: 1635418-1635639 bp Feature: gene Location: 1636516-1636755 bp Feature: gene Location: 1637259-1638779 bp Feature: domain Description: RVT_N Location: 1637286-1637532 bp Feature: domain Description: RVT_N Location: 163 7286-163 753 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1637583-1638006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163 7583 -163 8006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1638012-1638177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163 8012-163 8177 bp Feature: domain Description: GIIM Note: maturase Location: 1638234-1638414 bp Feature: domain Description: GIIM Note: maturase Location: 163 823 4-163 8414 bp Feature: domain Description: McrA Location: 1638432-1638735 bp Feature: domain Description: McrA Location: 163 843 2-163 873 5 bp Feature: gene Location: 1638836-1639933 bp Feature: domain Description: tspaseT_teng_C Location: 1639715-1639880 bp Feature: domain Description: tspaseT_teng_C Location: 163 9715-163 9880 bp Feature: gene Location: 1639937-1640254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), YjbI (COG2346), HicB (pfam05534), HTH_OrfB_IS605 (pfam12323), RRXRR (pfam14239), HNH_5 (pfam14279)
YadD (COG5464), RVT-GII/RVT-CRISPR/RVT-UG10/RVT-UNC(RVT-UNC), PDDEXK_2 (pfam12784), DUF4351 (pfam14261), RecQ (COG0514), tspaseT_teng_C (TIGR01766)

Seq: JAAHIH010000003.1 Moorea sp. SIOASIH ASIH_NODE_3, whole genome shotgun sequence (1458736 bp)
Overview 1 RT 1: 132271-138958 bp 2 RT 2: 435444-441592 bp 3 RT 3: 910967-916577 bp 4 RT 4: 1091628-1097210 bp 5 RT 5: 1297623-1304341 bp Neighborhood of RT #1 [132271, 139305] RVT_N RVT-GII RVT-GII GIIM McrA RVT-UG4 Haem_oxygenas_2 YfdV Neighborhood of RT #2 [435444, 441592] Uma2 LapA_dom RVT_N RVT-GII GIIM HNHc InsQ Neighborhood of RT #3 [910967, 916747] InsQ InsQ RVT_N RVT-GII RVT-GII GIIM McrA PerM Neighborhood of RT #4 [1091628, 1097210] COG3464 DDE_Tnp_ISL3 RVT_N RVT-GII GIIM HNHc RecQ Neighborhood of RT #5 [1297623, 1304376] sucr_synth InsQ RVT_N RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA DDE_5 Feature: gene Location: 132271-132585 bp Feature: gene Location: 132838-133230 bp Feature: gene Location: 133285-134799 bp Feature: domain Description: RVT_N Location: 133312-133558 bp Feature: domain Description: RVT_N Location: 133312-133558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133609-134029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133609-134 029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134038-134203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134 038-134 203 bp Feature: domain Description: GIIM Note: maturase Location: 134260-134449 bp Feature: domain Description: GIIM Note: maturase Location: 134 260-134 4 4 9 bp Feature: domain Description: McrA Location: 134452-134758 bp Feature: domain Description: McrA Location: 134 4 52-134 758 bp Feature: gene Location: 135023-135277 bp Feature: gene Location: 135308-136129 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 135662-136070 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 135662-136070 bp Feature: gene Location: 137216-138175 bp Feature: domain Description: Haem_oxygenas_2 Location: 137534-138101 bp Feature: domain Description: Haem_oxygenas_2 Location: 137534 -138101 bp Feature: gene Location: 138181-139305 bp Feature: domain Description: YfdV Location: 138190-138958 bp Feature: domain Description: YfdV Location: 138190-138958 bp Feature: gene Location: 435444-436022 bp Feature: domain Description: Uma2 Location: 435537-435912 bp Feature: domain Description: Uma2 Location: 4 35537-4 35912 bp Feature: gene Location: 436101-436610 bp Feature: domain Description: LapA_dom Location: 436422-436593 bp Feature: domain Description: LapA_dom Location: 4 364 22-4 36593 bp Feature: gene Location: 437412-439247 bp Feature: domain Description: RVT_N Location: 437475-437721 bp Feature: domain Description: RVT_N Location: 4 374 75-4 37721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437769-438441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 37769-4 384 4 1 bp Feature: domain Description: GIIM Note: maturase Location: 438513-438747 bp Feature: domain Description: GIIM Note: maturase Location: 4 38513-4 3874 7 bp Feature: domain Description: HNHc Note: nucleases Location: 438954-439107 bp Feature: domain Description: HNHc Note: nucleases Location: 4 38954 -4 39107 bp Feature: gene Location: 439335-440768 bp Feature: domain Description: InsQ Location: 439551-440646 bp Feature: domain Description: InsQ Location: 4 39551-4 4 064 6 bp Feature: gene Location: 440927-441592 bp Feature: gene Location: 910967-911758 bp Feature: domain Description: InsQ Location: 910979-911741 bp Feature: domain Description: InsQ Location: 910979-91174 1 bp Feature: gene Location: 911865-912191 bp Feature: domain Description: InsQ Location: 911868-912132 bp Feature: domain Description: InsQ Location: 911868-912132 bp Feature: gene Location: 912747-914258 bp Feature: domain Description: RVT_N Location: 912774-913020 bp Feature: domain Description: RVT_N Location: 912774 -913020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913071-913494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913071-9134 94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913503-913665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913503-913665 bp Feature: domain Description: GIIM Note: maturase Location: 913722-913908 bp Feature: domain Description: GIIM Note: maturase Location: 913722-913908 bp Feature: domain Description: McrA Location: 913920-914223 bp Feature: domain Description: McrA Location: 913920-914 223 bp Feature: gene Location: 914500-915321 bp Feature: gene Location: 915494-916747 bp Feature: domain Description: PerM Location: 915557-916577 bp Feature: domain Description: PerM Location: 915557-916577 bp Feature: gene Location: 1091628-1092464 bp Feature: domain Description: COG3464 Location: 1091763-1092459 bp Feature: domain Description: COG34 64 Location: 1091763-10924 59 bp Feature: gene Location: 1092552-1092884 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1092558-1092861 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1092558-1092861 bp Feature: gene Location: 1093604-1095442 bp Feature: domain Description: RVT_N Location: 1093646-1093901 bp Feature: domain Description: RVT_N Location: 109364 6-1093901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1093943-1094621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109394 3-1094 621 bp Feature: domain Description: GIIM Note: maturase Location: 1094801-1095035 bp Feature: domain Description: GIIM Note: maturase Location: 1094 801-1095035 bp Feature: domain Description: HNHc Note: nucleases Location: 1095254-1095413 bp Feature: domain Description: HNHc Note: nucleases Location: 1095254 -10954 13 bp Feature: gene Location: 1095501-1096307 bp Feature: domain Description: RecQ Location: 1095711-1096062 bp Feature: domain Description: RecQ Location: 1095711-1096062 bp Feature: gene Location: 1096362-1097210 bp Feature: gene Location: 1297623-1297859 bp Feature: domain Description: sucr_synth Location: 1297629-1297809 bp Feature: domain Description: sucr_synth Location: 1297629-1297809 bp Feature: gene Location: 1298283-1298903 bp Feature: domain Description: InsQ Location: 1298313-1298763 bp Feature: domain Description: InsQ Location: 1298313-1298763 bp Feature: gene Location: 1299009-1300694 bp Feature: domain Description: RVT_N Location: 1299054-1299300 bp Feature: domain Description: RVT_N Location: 1299054 -1299300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1299342-1299993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129934 2-1299993 bp Feature: domain Description: GIIM Note: maturase Location: 1300083-1300305 bp Feature: domain Description: GIIM Note: maturase Location: 1300083-1300305 bp Feature: domain Description: McrA Location: 1300389-1300656 bp Feature: domain Description: McrA Location: 1300389-1300656 bp Feature: gene Location: 1301337-1302842 bp Feature: domain Description: RVT_N Location: 1301361-1301607 bp Feature: domain Description: RVT_N Location: 1301361-1301607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301658-1302084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301658-1302084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1302093-1302252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1302093-1302252 bp Feature: domain Description: GIIM Note: maturase Location: 1302309-1302498 bp Feature: domain Description: GIIM Note: maturase Location: 1302309-13024 98 bp Feature: domain Description: McrA Location: 1302510-1302810 bp Feature: domain Description: McrA Location: 1302510-1302810 bp Feature: gene Location: 1302899-1303219 bp Feature: gene Location: 1303978-1304376 bp Feature: domain Description: DDE_5 Location: 1304026-1304341 bp Feature: domain Description: DDE_5 Location: 1304 026-1304 34 1 bp Sorry, your browser does not 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Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT-UG4, Haem_oxygenas_2 (pfam14518), YfdV (COG0679), Uma2 (pfam05685), LapA_dom (pfam06305), HNHc (smart00507)
InsQ (COG0675), PerM (COG0628), COG3464 (Transposase ), DDE_Tnp_ISL3 (pfam01610), RecQ (COG0514), sucr_synth (TIGR02470), DDE_5 (pfam13546)

Seq: JAAHIH010000004.1 Moorea sp. SIOASIH ASIH_NODE_4, whole genome shotgun sequence (1319300 bp)
Overview 1 RT 1: 2762-8627 bp 2 RT 2: 11766-18806 bp 3 RT 3: 37574-42449 bp 4 RT 4: 81206-88838 bp 5 RT 5: 116161-119697 bp 6 RT 6: 196196-201363 bp 7 RT 7: 826552-831235 bp 8 RT 8: 1279967-1286133 bp Neighborhood of RT #1 [2762, 8695] InsQ RVT_N RVT-GII GIIM McrA DUF3172 COG3367 Neighborhood of RT #2 [11766, 18806] InsQ RVT_N RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA CutA1 Neighborhood of RT #3 [37574, 42449] InsQ RVT_N RVT-GII GIIM McrA fliH Neighborhood of RT #4 [81206, 88838] RVT_N RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII GIIM HNHc Neighborhood of RT #5 [116161, 119697] InsQ RVT_N RVT-GII RVT-GII GIIM McrA Neighborhood of RT #6 [196196, 201380] PBP2_NikA_DppA_OppA_like_20 RVT_N RVT-GII RVT-GII GIIM McrA InsQ Neighborhood of RT #7 [826552, 831235] YadD McrA RVT-UNC RVT_N RVT-GII PRK10879 Prolidase Neighborhood of RT #8 [1279967, 1286133] RVT_N RVT-GII GIIM HNHc InsQ Feature: gene Location: 2762-4489 bp Feature: domain Description: InsQ Location: 3338-4481 bp Feature: domain Description: InsQ Location: 3338-4481 bp Feature: gene Location: 4562-4756 bp Feature: gene Location: 5098-6609 bp Feature: domain Description: RVT_N Location: 5125-5371 bp Feature: domain Description: RVT_N Location: 5 125 -5 371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5422-6025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 422-6025 bp Feature: domain Description: GIIM Note: maturase Location: 6082-6265 bp Feature: domain Description: GIIM Note: maturase Location: 6082-6265 bp Feature: domain Description: McrA Location: 6274-6583 bp Feature: domain Description: McrA Location: 6274-65 83 bp Feature: gene Location: 6878-7384 bp Feature: domain Description: DUF3172 Location: 6923-7337 bp Feature: domain Description: DUF3172 Location: 6923-7337 bp Feature: gene Location: 7595-8695 bp Feature: domain Description: COG3367 Location: 7625-8627 bp Feature: domain Description: COG3367 Location: 7625 -8627 bp Feature: gene Location: 11766-13052 bp Feature: domain Description: InsQ Location: 11778-12960 bp Feature: domain Description: InsQ Location: 11778-12960 bp Feature: gene Location: 13112-13285 bp Feature: gene Location: 13608-15293 bp Feature: domain Description: RVT_N Location: 13653-13899 bp Feature: domain Description: RVT_N Location: 1365 3-13899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13941-14592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13941-145 92 bp Feature: domain Description: GIIM Note: maturase Location: 14682-14904 bp Feature: domain Description: GIIM Note: maturase Location: 14682-14904 bp Feature: domain Description: McrA Location: 14988-15255 bp Feature: domain Description: McrA Location: 14988-15 25 5 bp Feature: gene Location: 15910-17430 bp Feature: domain Description: RVT_N Location: 15934-16180 bp Feature: domain Description: RVT_N Location: 15 934-16180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16231-16657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16231-1665 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16660-16825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16660-16825 bp Feature: domain Description: GIIM Note: maturase Location: 16882-17068 bp Feature: domain Description: GIIM Note: maturase Location: 16882-17068 bp Feature: domain Description: McrA Location: 17077-17389 bp Feature: domain Description: McrA Location: 17077-17389 bp Feature: gene Location: 18152-18505 bp Feature: domain Description: CutA1 Location: 18341-18503 bp Feature: domain Description: CutA1 Location: 18341-185 03 bp Feature: gene Location: 18636-18806 bp Feature: gene Location: 37574-39301 bp Feature: domain Description: InsQ Location: 38150-39293 bp Feature: domain Description: InsQ Location: 3815 0-39293 bp Feature: gene Location: 39374-39568 bp Feature: gene Location: 39910-41421 bp Feature: domain Description: RVT_N Location: 39937-40183 bp Feature: domain Description: RVT_N Location: 39937-40183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40234-40837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40234-40837 bp Feature: domain Description: GIIM Note: maturase Location: 40894-41077 bp Feature: domain Description: GIIM Note: maturase Location: 40894-41077 bp Feature: domain Description: McrA Location: 41086-41395 bp Feature: domain Description: McrA Location: 41086-41395 bp Feature: gene Location: 41583-42191 bp Feature: domain Description: fliH Location: 41874-42015 bp Feature: domain Description: fliH Location: 41874-42015 bp Feature: gene Location: 42222-42449 bp Feature: gene Location: 81206-81412 bp Feature: gene Location: 81420-81560 bp Feature: gene Location: 81721-83406 bp Feature: domain Description: RVT_N Location: 81766-82012 bp Feature: domain Description: RVT_N Location: 81766-82012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82054-82705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8205 4-82705 bp Feature: domain Description: GIIM Note: maturase Location: 82795-83017 bp Feature: domain Description: GIIM Note: maturase Location: 82795 -83017 bp Feature: domain Description: McrA Location: 83101-83368 bp Feature: domain Description: McrA Location: 83101-83368 bp Feature: gene Location: 84023-85543 bp Feature: domain Description: RVT_N Location: 84047-84293 bp Feature: domain Description: RVT_N Location: 84047-84293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84344-84770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84344-84770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84773-84938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84773-84938 bp Feature: domain Description: GIIM Note: maturase Location: 84995-85181 bp Feature: domain Description: GIIM Note: maturase Location: 84995 -85 181 bp Feature: domain Description: McrA Location: 85190-85502 bp Feature: domain Description: McrA Location: 85 190-85 5 02 bp Feature: gene Location: 86328-88169 bp Feature: domain Description: RVT_N Location: 86403-86649 bp Feature: domain Description: RVT_N Location: 86403-86649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86697-87369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86697-87369 bp Feature: domain Description: GIIM Note: maturase Location: 87441-87675 bp Feature: domain Description: GIIM Note: maturase Location: 87441-87675 bp Feature: domain Description: HNHc Note: nucleases Location: 87882-88047 bp Feature: domain Description: HNHc Note: nucleases Location: 87882-88047 bp Feature: gene Location: 88206-88664 bp Feature: gene Location: 88692-88838 bp Feature: gene Location: 116161-116445 bp Feature: domain Description: InsQ Location: 116167-116428 bp Feature: domain Description: InsQ Location: 116167-116428 bp Feature: gene Location: 116457-116630 bp Feature: gene Location: 116972-117709 bp Feature: domain Description: RVT_N Location: 117008-117254 bp Feature: domain Description: RVT_N Location: 117008-11725 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117305-117686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117305 -117686 bp Feature: gene Location: 117753-118496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117756-117900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11775 6-117900 bp Feature: domain Description: GIIM Note: maturase Location: 117957-118137 bp Feature: domain Description: GIIM Note: maturase Location: 11795 7-118137 bp Feature: domain Description: McrA Location: 118158-118458 bp Feature: domain Description: McrA Location: 11815 8-11845 8 bp Feature: gene Location: 118551-118787 bp Feature: gene Location: 119452-119697 bp Feature: gene Location: 196196-197842 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like_20 Location: 196343-197786 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like_20 Location: 196343-197786 bp Feature: gene Location: 198137-198334 bp Feature: gene Location: 198341-199855 bp Feature: domain Description: RVT_N Location: 198368-198614 bp Feature: domain Description: RVT_N Location: 198368-198614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198665-199085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198665 -199085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199094-199259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199094-19925 9 bp Feature: domain Description: GIIM Note: maturase Location: 199316-199505 bp Feature: domain Description: GIIM Note: maturase Location: 199316-1995 05 bp Feature: domain Description: McrA Location: 199508-199814 bp Feature: domain Description: McrA Location: 1995 08-199814 bp Feature: gene Location: 200079-200333 bp Feature: gene Location: 200787-201380 bp Feature: domain Description: InsQ Location: 201072-201363 bp Feature: domain Description: InsQ Location: 201072-201363 bp Feature: gene Location: 826552-826857 bp Feature: domain Description: YadD Location: 826633-826795 bp Feature: domain Description: YadD Location: 826633-826795 bp Feature: gene Location: 826979-827401 bp Feature: domain Description: McrA Location: 827054-827363 bp Feature: domain Description: McrA Location: 82705 4-827363 bp Feature: gene Location: 827687-827827 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 827690-827825 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 827690-827825 bp Feature: gene Location: 827859-828740 bp Feature: domain Description: RVT_N Location: 828018-828264 bp Feature: domain Description: RVT_N Location: 828018-828264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 828315-828696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 828315 -828696 bp Feature: gene Location: 829673-831055 bp Feature: domain Description: PRK10879 Location: 829712-829877 bp Feature: domain Description: PRK10879 Location: 829712-829877 bp Feature: domain Description: Prolidase Location: 830183-831005 bp Feature: domain Description: Prolidase Location: 830183-831005 bp Feature: gene Location: 831095-831235 bp Feature: gene Location: 1279967-1280278 bp Feature: gene Location: 1280376-1280612 bp Feature: gene Location: 1281128-1282963 bp Feature: domain Description: RVT_N Location: 1281191-1281437 bp Feature: domain Description: RVT_N Location: 1281191-1281437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1281485-1282157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1281485 -128215 7 bp Feature: domain Description: GIIM Note: maturase Location: 1282229-1282463 bp Feature: domain Description: GIIM Note: maturase Location: 1282229-1282463 bp Feature: domain Description: HNHc Note: nucleases Location: 1282670-1282823 bp Feature: domain Description: HNHc Note: nucleases Location: 1282670-1282823 bp Feature: gene Location: 1283051-1284484 bp Feature: domain Description: InsQ Location: 1283375-1284362 bp Feature: domain Description: InsQ Location: 1283375 -1284362 bp Feature: gene Location: 1285396-1286133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF3172 (pfam11371), COG3367 (Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family ), CutA1 (pfam03091), fliH (PRK13386), HNHc (smart00507)
PBP2_NikA_DppA_OppA_like_20 (cd08519), YadD (COG5464), RVT-GII/RVT-CRISPR/RVT-UG10/RVT-UNC(RVT-UNC), PRK10879 (proline aminopeptidase P II; Provisional), Prolidase (cd01087)

Seq: JAAHIH010000005.1 Moorea sp. SIOASIH ASIH_NODE_5, whole genome shotgun sequence (1108072 bp)
Overview 1 RT 1: 482472-485511 bp 2 RT 2: 761719-764353 bp 3 RT 3: 1008139-1012709 bp 4 RT 4: 1042446-1044924 bp 5 RT 5: 1071654-1088147 bp Neighborhood of RT #1 [482472, 485511] RVT-Retrons Neighborhood of RT #2 [761719, 764353] excise RVT-UG4 Neighborhood of RT #3 [1008139, 1012720] InsQ RVT_N RVT-GII RVT-GII GIIM McrA CpcS Neighborhood of RT #4 [1042446, 1044924] RVT-GII GIIM Neighborhood of RT #5 [1071654, 1088155] McrA RVT_N RVT-GII RVT-GII RVT_N RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII GIIM McrA YqxC RVT-GII GIIM HNHc RVT_N RVT-GII DUF1822 Feature: gene Location: 482472-482741 bp Feature: gene Location: 482767-482973 bp Feature: gene Location: 482993-484405 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 483539-484160 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 483539-48416 0 bp Feature: gene Location: 484441-484794 bp Feature: gene Location: 484795-485511 bp Feature: gene Location: 761719-762171 bp Feature: domain Description: excise Location: 761740-761845 bp Feature: domain Description: excise Location: 76 1740-76 1845 bp Feature: gene Location: 762600-762785 bp Feature: gene Location: 762862-763506 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 762874-763228 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 76 2874-76 3228 bp Feature: gene Location: 763665-764156 bp Feature: gene Location: 764180-764353 bp Feature: gene Location: 1008139-1008267 bp Feature: gene Location: 1008595-1009839 bp Feature: domain Description: InsQ Location: 1008694-1009678 bp Feature: domain Description: InsQ Location: 10086 94-10096 78 bp Feature: gene Location: 1010384-1011913 bp Feature: domain Description: RVT_N Location: 1010405-1010651 bp Feature: domain Description: RVT_N Location: 1010405-10106 51 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010702-1011125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010702-1011125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011128-1011296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011128-1011296 bp Feature: domain Description: GIIM Note: maturase Location: 1011353-1011533 bp Feature: domain Description: GIIM Note: maturase Location: 1011353-1011533 bp Feature: domain Description: McrA Location: 1011548-1011854 bp Feature: domain Description: McrA Location: 1011548-1011854 bp Feature: gene Location: 1011931-1012167 bp Feature: gene Location: 1012199-1012720 bp Feature: domain Description: CpcS Location: 1012214-1012709 bp Feature: domain Description: CpcS Location: 1012214-1012709 bp Feature: gene Location: 1042446-1042676 bp Feature: gene Location: 1043305-1043526 bp Feature: gene Location: 1043498-1044142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043519-1043672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043519-10436 72 bp Feature: domain Description: GIIM Note: maturase Location: 1043729-1043873 bp Feature: domain Description: GIIM Note: maturase Location: 1043729-1043873 bp Feature: gene Location: 1044587-1044715 bp Feature: gene Location: 1044718-1044924 bp Feature: gene Location: 1071654-1072124 bp Feature: gene Location: 1072419-1072835 bp Feature: domain Description: McrA Location: 1072503-1072803 bp Feature: domain Description: McrA Location: 1072503-1072803 bp Feature: gene Location: 1073121-1074029 bp Feature: domain Description: RVT_N Location: 1073145-1073391 bp Feature: domain Description: RVT_N Location: 1073145-1073391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073442-1073868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073442-107386 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073871-1074027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073871-1074027 bp Feature: gene Location: 1074528-1076213 bp Feature: domain Description: RVT_N Location: 1074573-1074819 bp Feature: domain Description: RVT_N Location: 1074573-1074819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1074861-1075512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107486 1-1075512 bp Feature: domain Description: GIIM Note: maturase Location: 1075602-1075824 bp Feature: domain Description: GIIM Note: maturase Location: 10756 02-1075824 bp Feature: domain Description: McrA Location: 1075908-1076175 bp Feature: domain Description: McrA Location: 1075908-1076 175 bp Feature: gene Location: 1076856-1078361 bp Feature: domain Description: RVT_N Location: 1076880-1077126 bp Feature: domain Description: RVT_N Location: 1076 880-1077126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1077177-1077597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1077177-1077597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1077609-1077771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10776 09-1077771 bp Feature: domain Description: GIIM Note: maturase Location: 1077828-1078017 bp Feature: domain Description: GIIM Note: maturase Location: 1077828-1078017 bp Feature: domain Description: McrA Location: 1078032-1078329 bp Feature: domain Description: McrA Location: 1078032-1078329 bp Feature: gene Location: 1078622-1080298 bp Feature: domain Description: RVT_N Location: 1078661-1078907 bp Feature: domain Description: RVT_N Location: 10786 6 1-1078907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1078949-1079600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1078949-10796 00 bp Feature: domain Description: GIIM Note: maturase Location: 1079681-1079912 bp Feature: domain Description: GIIM Note: maturase Location: 10796 81-1079912 bp Feature: domain Description: McrA Location: 1079954-1080260 bp Feature: domain Description: McrA Location: 1079954-108026 0 bp Feature: gene Location: 1081613-1082122 bp Feature: gene Location: 1082198-1082416 bp Feature: gene Location: 1082504-1083322 bp Feature: domain Description: YqxC Location: 1082513-1083263 bp Feature: domain Description: YqxC Location: 1082513-108326 3 bp Feature: gene Location: 1083673-1083843 bp Feature: gene Location: 1083896-1085080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1083902-1084271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1083902-1084271 bp Feature: domain Description: GIIM Note: maturase Location: 1084343-1084568 bp Feature: domain Description: GIIM Note: maturase Location: 1084343-108456 8 bp Feature: domain Description: HNHc Note: nucleases Location: 1084790-1084949 bp Feature: domain Description: HNHc Note: nucleases Location: 1084790-1084949 bp Feature: gene Location: 1085268-1085735 bp Feature: domain Description: RVT_N Location: 1085331-1085577 bp Feature: domain Description: RVT_N Location: 1085331-1085577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1085625-1085706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10856 25-1085706 bp Feature: gene Location: 1086396-1086785 bp Feature: gene Location: 1087265-1088155 bp Feature: domain Description: DUF1822 Location: 1087610-1088147 bp Feature: domain Description: DUF1822 Location: 10876 10-1088147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, excise (TIGR01764), RVT-UG4, InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), CpcS (cd16339), YqxC (COG1189)
HNHc (smart00507), DUF1822 (pfam08852)

Seq: JAAHIH010000006.1 Moorea sp. SIOASIH ASIH_NODE_6, whole genome shotgun sequence (914706 bp)
Overview 1 RT 1: 503268-509310 bp 2 RT 2: 520717-524542 bp Neighborhood of RT #1 [503268, 509345] PRK05627 RVT_N RVT-GII RVT-GII GIIM McrA MoxR DHC Neighborhood of RT #2 [520717, 524542] InsQ RVT_N RVT-GII GIIM McrA DUF820 Feature: gene Location: 503268-504371 bp Feature: domain Description: PRK05627 Location: 503358-504357 bp Feature: domain Description: PRK05627 Location: 503358-504357 bp Feature: gene Location: 504737-504931 bp Feature: gene Location: 505750-507270 bp Feature: domain Description: RVT_N Location: 505774-506020 bp Feature: domain Description: RVT_N Location: 5057 7 4-506020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506071-506497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50607 1-506497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506500-506665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506500-506665 bp Feature: domain Description: GIIM Note: maturase Location: 506722-506908 bp Feature: domain Description: GIIM Note: maturase Location: 5067 22-506908 bp Feature: domain Description: McrA Location: 506917-507229 bp Feature: domain Description: McrA Location: 506917 -507 229 bp Feature: gene Location: 507848-508756 bp Feature: domain Description: MoxR Location: 507854-508751 bp Feature: domain Description: MoxR Location: 507 854-5087 51 bp Feature: gene Location: 508776-509345 bp Feature: domain Description: DHC Location: 508998-509310 bp Feature: domain Description: DHC Location: 508998-509310 bp Feature: gene Location: 520717-521283 bp Feature: domain Description: InsQ Location: 520774-521224 bp Feature: domain Description: InsQ Location: 5207 7 4-521224 bp Feature: gene Location: 521486-521695 bp Feature: gene Location: 522073-523584 bp Feature: domain Description: RVT_N Location: 522100-522346 bp Feature: domain Description: RVT_N Location: 522100-522346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522397-523000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522397 -523000 bp Feature: domain Description: GIIM Note: maturase Location: 523057-523246 bp Feature: domain Description: GIIM Note: maturase Location: 523057 -523246 bp Feature: domain Description: McrA Location: 523309-523558 bp Feature: domain Description: McrA Location: 523309-523558 bp Feature: gene Location: 523716-524114 bp Feature: domain Description: DUF820 Location: 523767-524076 bp Feature: domain Description: DUF820 Location: 5237 67 -52407 6 bp Feature: gene Location: 524402-524542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05627 (bifunctional riboflavin kinase/FAD synthetase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), MoxR (COG0714), DHC (pfam09626), InsQ (COG0675), DUF820

Seq: JAAHIH010000008.1 Moorea sp. SIOASIH ASIH_NODE_8, whole genome shotgun sequence (342044 bp)
Overview 1 RT 1: 24643-30556 bp Neighborhood of RT #1 [24643, 30579] Methyltransf_25 RVT_N RVT-GII GIIM McrA InsQ Feature: gene Location: 24643-25380 bp Feature: domain Description: Methyltransf_25 Location: 24793-25093 bp Feature: domain Description: Methyltransf_25 Location: 24793-25093 bp Feature: gene Location: 25824-26165 bp Feature: gene Location: 26780-28291 bp Feature: domain Description: RVT_N Location: 26807-27053 bp Feature: domain Description: RVT_N Location: 268 07-27053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27104-27707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27104-27707 bp Feature: domain Description: GIIM Note: maturase Location: 27764-27947 bp Feature: domain Description: GIIM Note: maturase Location: 27764-27947 bp Feature: domain Description: McrA Location: 27956-28265 bp Feature: domain Description: McrA Location: 27956-28 265 bp Feature: gene Location: 28633-28827 bp Feature: gene Location: 28840-30579 bp Feature: domain Description: InsQ Location: 29626-30556 bp Feature: domain Description: InsQ Location: 29626-30556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)

Seq: JAAHIH010000009.1 Moorea sp. SIOASIH ASIH_NODE_9, whole genome shotgun sequence (322731 bp)
Overview 1 RT 1: 288158-292698 bp Neighborhood of RT #1 [288158, 292760] excise RVT_N RVT-GII RVT-GII McrA YadD Feature: gene Location: 288158-288610 bp Feature: domain Description: excise Location: 288179-288278 bp Feature: domain Description: excise Location: 288179 -288278 bp Feature: gene Location: 289177-289425 bp Feature: gene Location: 289975-290886 bp Feature: domain Description: RVT_N Location: 290002-290248 bp Feature: domain Description: RVT_N Location: 29 0002-29 0248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290299-290725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29 029 9 -29 0725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290728-290884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29 0728-29 0884 bp Feature: gene Location: 291172-291594 bp Feature: domain Description: McrA Location: 291250-291556 bp Feature: domain Description: McrA Location: 29 1250-29 1556 bp Feature: gene Location: 291825-292760 bp Feature: domain Description: YadD Location: 291840-292698 bp Feature: domain Description: YadD Location: 29 1840-29 269 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT excise (TIGR01764), RVT_N (pfam13655), RVT-GII, McrA (COG4058), YadD (COG5464)