myRT

myRT report for GCA_010671945.1_ASM1067194v1

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Seq: JAAHIE010001007.1 Moorea sp. SIO4E2 4E2_NODE_1007, whole genome shotgun sequence (1954 bp)
Overview 1 RT 1: 507-1809 bp Neighborhood of RT #1 [507, 1952] RVT_N RVT-GII GIIM Feature: gene Location: 507-1952 bp Feature: domain Description: RVT_N Location: 549-795 bp Feature: domain Description: RVT_N Location: 549-795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1 497 bp Feature: domain Description: GIIM Note: maturase Location: 1575-1809 bp Feature: domain Description: GIIM Note: maturase Location: 1 575-1 809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHIE010001008.1 Moorea sp. SIO4E2 4E2_NODE_1008, whole genome shotgun sequence (1951 bp)
Overview 1 RT 1: 261-1908 bp Neighborhood of RT #1 [261, 1940] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 261-1940 bp Feature: domain Description: RVT_N Location: 309-555 bp Feature: domain Description: RVT_N Location: 309-555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603-1242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603-12 42 bp Feature: domain Description: YkfC Location: 1383-1539 bp Feature: domain Description: YkfC Location: 1383-1539 bp Feature: domain Description: HNHc Note: nucleases Location: 1752-1908 bp Feature: domain Description: HNHc Note: nucleases Location: 1752 -1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: JAAHIE010001042.1 Moorea sp. SIO4E2 4E2_NODE_1042, whole genome shotgun sequence (1873 bp)
Overview 1 RT 1: 3-1257 bp Neighborhood of RT #1 [3, 1298] RVT-GII RVT_N RVT-GII Feature: gene Location: 3-146 bp Feature: gene Location: 176-526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185-383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185-3 83 bp Feature: gene Location: 543-1298 bp Feature: domain Description: RVT_N Location: 582-828 bp Feature: domain Description: RVT_N Location: 582-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870-1257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870-1257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655)

Seq: JAAHIE010001085.1 Moorea sp. SIO4E2 4E2_NODE_1085, whole genome shotgun sequence (1753 bp)
Overview 1 RT 1: 378-1752 bp Neighborhood of RT #1 [378, 1752] RVT-UG4 Feature: gene Location: 378-932 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 729-888 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 729-888 bp Feature: gene Location: 967-1164 bp Feature: gene Location: 1222-1752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: JAAHIE010001106.1 Moorea sp. SIO4E2 4E2_NODE_1106, whole genome shotgun sequence (1706 bp)
Overview 1 RT 1: 3-1512 bp Neighborhood of RT #1 [3, 1622] RVT-GII GIIM HNHc InsQ Feature: gene Location: 3-1223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-489 bp Feature: domain Description: GIIM Note: maturase Location: 576-801 bp Feature: domain Description: GIIM Note: maturase Location: 5 76-801 bp Feature: domain Description: HNHc Note: nucleases Location: 1014-1179 bp Feature: domain Description: HNHc Note: nucleases Location: 1014-1179 bp Feature: gene Location: 1392-1622 bp Feature: domain Description: InsQ Location: 1404-1512 bp Feature: domain Description: InsQ Location: 1404-15 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHIE010001250.1 Moorea sp. SIO4E2 4E2_NODE_1250, whole genome shotgun sequence (1348 bp)
Overview 1 RT 1: 202-619 bp Neighborhood of RT #1 [202, 630] RVT_N RVT-GII Feature: gene Location: 202-630 bp Feature: domain Description: RVT_N Location: 247-493 bp Feature: domain Description: RVT_N Location: 247-493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-6 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHIE010001301.1 Moorea sp. SIO4E2 4E2_NODE_1301, whole genome shotgun sequence (1249 bp)
Overview 1 RT 1: 109-1207 bp Neighborhood of RT #1 [109, 1248] RVT-GII GIIM McrA Feature: gene Location: 109-1248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-547 bp Feature: domain Description: GIIM Note: maturase Location: 631-859 bp Feature: domain Description: GIIM Note: maturase Location: 631-859 bp Feature: domain Description: McrA Location: 940-1207 bp Feature: domain Description: McrA Location: 940-1207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010001302.1 Moorea sp. SIO4E2 4E2_NODE_1302, whole genome shotgun sequence (1248 bp)
Overview 1 RT 1: 78-1212 bp Neighborhood of RT #1 [78, 1247] RVT-GII GIIM McrA Feature: gene Location: 78-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84-651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 4-651 bp Feature: domain Description: GIIM Note: maturase Location: 711-915 bp Feature: domain Description: GIIM Note: maturase Location: 711-915 bp Feature: domain Description: McrA Location: 927-1212 bp Feature: domain Description: McrA Location: 927-1212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010001310.1 Moorea sp. SIO4E2 4E2_NODE_1310, whole genome shotgun sequence (1238 bp)
Overview 1 RT 1: 24-1213 bp Neighborhood of RT #1 [24, 1236] RVT_N RVT_N RVT-GII RVT-GII Feature: gene Location: 24-236 bp Feature: domain Description: RVT_N Location: 69-204 bp Feature: domain Description: RVT_N Location: 69 -204 bp Feature: gene Location: 304-576 bp Feature: domain Description: RVT_N Location: 307-415 bp Feature: domain Description: RVT_N Location: 307-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-559 bp Feature: gene Location: 622-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 664-1213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 664-1213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHIE010001343.1 Moorea sp. SIO4E2 4E2_NODE_1343, whole genome shotgun sequence (1179 bp)
Overview 1 RT 1: 90-1140 bp Neighborhood of RT #1 [90, 1178] RVT-GII GIIM McrA Feature: gene Location: 90-1178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-582 bp Feature: domain Description: GIIM Note: maturase Location: 639-780 bp Feature: domain Description: GIIM Note: maturase Location: 639-780 bp Feature: domain Description: McrA Location: 855-1140 bp Feature: domain Description: McrA Location: 855-1140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000177.1 Moorea sp. SIO4E2 4E2_NODE_177, whole genome shotgun sequence (12791 bp)
Overview 1 RT 1: 246-3516 bp Neighborhood of RT #1 [246, 3516] RVT-Retrons Feature: gene Location: 246-1658 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 792-1413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 792-1413 bp Feature: gene Location: 1914-2630 bp Feature: gene Location: 2836-3516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAAHIE010000273.1 Moorea sp. SIO4E2 4E2_NODE_273, whole genome shotgun sequence (9644 bp)
Overview 1 RT 1: 1-2690 bp Neighborhood of RT #1 [1, 2690] InsQ RVT-UG4 Feature: gene Location: 1-969 bp Feature: domain Description: InsQ Location: 139-844 bp Feature: domain Description: InsQ Location: 139-844 bp Feature: gene Location: 1014-1688 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1020-1308 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1020-1308 bp Feature: gene Location: 1821-2210 bp Feature: gene Location: 2520-2690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-UG4

Seq: JAAHIE010000283.1 Moorea sp. SIO4E2 4E2_NODE_283, whole genome shotgun sequence (9363 bp)
Overview 1 RT 1: 3823-9183 bp Neighborhood of RT #1 [3823, 9227] DDE_Tnp_1 RVT_N RVT-GII GIIM McrA HNH Feature: gene Location: 3823-5124 bp Feature: domain Description: DDE_Tnp_1 Location: 4234-4759 bp Feature: domain Description: DDE_Tnp_1 Location: 4234-4759 bp Feature: gene Location: 5219-5596 bp Feature: gene Location: 6490-8049 bp Feature: domain Description: RVT_N Location: 6529-6775 bp Feature: domain Description: RVT_N Location: 6529-6775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6817-7468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6817-7468 bp Feature: domain Description: GIIM Note: maturase Location: 7549-7780 bp Feature: domain Description: GIIM Note: maturase Location: 7549-7780 bp Feature: domain Description: McrA Location: 7825-8020 bp Feature: domain Description: McrA Location: 7825-8020 bp Feature: gene Location: 9027-9227 bp Feature: domain Description: HNH Note: nucleases Location: 9051-9183 bp Feature: domain Description: HNH Note: nucleases Location: 9051-9183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HNH (pfam01844)

Seq: JAAHIE010000484.1 Moorea sp. SIO4E2 4E2_NODE_484, whole genome shotgun sequence (5495 bp)
Overview 1 RT 1: 1-5311 bp Neighborhood of RT #1 [1, 5355] RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII HNH Feature: gene Location: 1-135 bp Feature: gene Location: 190-618 bp Feature: gene Location: 834-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-954 bp Feature: domain Description: GIIM Note: maturase Location: 1044-1266 bp Feature: domain Description: GIIM Note: maturase Location: 1044-1266 bp Feature: domain Description: McrA Location: 1350-1617 bp Feature: domain Description: McrA Location: 1350-1617 bp Feature: gene Location: 1717-2520 bp Feature: domain Description: RVT_N Location: 1762-2008 bp Feature: domain Description: RVT_N Location: 1762-2008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2050-2437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2050-2437 bp Feature: gene Location: 3254-3991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260-3398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260-3398 bp Feature: domain Description: GIIM Note: maturase Location: 3458-3599 bp Feature: domain Description: GIIM Note: maturase Location: 3458-3599 bp Feature: domain Description: McrA Location: 3644-3950 bp Feature: domain Description: McrA Location: 3644-3950 bp Feature: gene Location: 4038-4763 bp Feature: domain Description: RVT_N Location: 4062-4308 bp Feature: domain Description: RVT_N Location: 4062-4308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4359-4740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4359-4740 bp Feature: gene Location: 4784-5086 bp Feature: gene Location: 5215-5355 bp Feature: domain Description: HNH Note: nucleases Location: 5221-5311 bp Feature: domain Description: HNH Note: nucleases Location: 5221-5311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), HNH (pfam01844)

Seq: JAAHIE010000550.1 Moorea sp. SIO4E2 4E2_NODE_550, whole genome shotgun sequence (4556 bp)
Overview 1 RT 1: 2019-4554 bp Neighborhood of RT #1 [2019, 4554] McrA RVT_N RVT-GII RVT-GII Feature: gene Location: 2019-2222 bp Feature: gene Location: 2225-2506 bp Feature: domain Description: McrA Location: 2285-2465 bp Feature: domain Description: McrA Location: 2285-2465 bp Feature: gene Location: 2684-3601 bp Feature: domain Description: RVT_N Location: 2714-2960 bp Feature: domain Description: RVT_N Location: 2714-2960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3011-3431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3011-3431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440-3599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440-3599 bp Feature: gene Location: 4387-4554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII

Seq: JAAHIE010000583.1 Moorea sp. SIO4E2 4E2_NODE_583, whole genome shotgun sequence (4232 bp)
Overview 1 RT 1: 2-2640 bp Neighborhood of RT #1 [2, 2640] DUF4096 RVT_N RVT-GII GIIM Feature: gene Location: 2-199 bp Feature: gene Location: 212-445 bp Feature: domain Description: DUF4096 Location: 242-443 bp Feature: domain Description: DUF4096 Location: 242-443 bp Feature: gene Location: 913-1719 bp Feature: domain Description: RVT_N Location: 976-1219 bp Feature: domain Description: RVT_N Location: 976-1219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1261-1645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1261-16 45 bp Feature: gene Location: 1931-2362 bp Feature: domain Description: GIIM Note: maturase Location: 1994-2222 bp Feature: domain Description: GIIM Note: maturase Location: 1994-2222 bp Feature: gene Location: 2413-2640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHIE010000006.1 Moorea sp. SIO4E2 4E2_NODE_6, whole genome shotgun sequence (32729 bp)
Overview 1 RT 1: 22910-28359 bp Neighborhood of RT #1 [22910, 28359] glyQ DUF1460 RVT_N RVT-GII GIIM McrA Feature: gene Location: 22910-23875 bp Feature: domain Description: glyQ Location: 23003-23861 bp Feature: domain Description: glyQ Location: 23003-23861 bp Feature: gene Location: 24062-25087 bp Feature: domain Description: DUF1460 Location: 24371-25031 bp Feature: domain Description: DUF1460 Location: 24371-25031 bp Feature: gene Location: 25347-27062 bp Feature: domain Description: RVT_N Location: 25389-25635 bp Feature: domain Description: RVT_N Location: 25389-25635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25677-26328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25677-26328 bp Feature: domain Description: GIIM Note: maturase Location: 26406-26640 bp Feature: domain Description: GIIM Note: maturase Location: 26406-26640 bp Feature: domain Description: McrA Location: 26757-27027 bp Feature: domain Description: McrA Location: 26757-27027 bp Feature: gene Location: 27406-27597 bp Feature: gene Location: 28102-28359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glyQ (TIGR00388), DUF1460 (pfam07313), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000600.1 Moorea sp. SIO4E2 4E2_NODE_600, whole genome shotgun sequence (4089 bp)
Overview 1 RT 1: 361-3963 bp Neighborhood of RT #1 [361, 3965] RVT_N RVT-GII RVT_N RVT-GII GIIM HNHc RVT-GII GIIM Feature: gene Location: 361-531 bp Feature: gene Location: 566-1261 bp Feature: domain Description: RVT_N Location: 569-698 bp Feature: domain Description: RVT_N Location: 569-698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1250 bp Feature: gene Location: 1334-1549 bp Feature: gene Location: 1879-3195 bp Feature: domain Description: RVT_N Location: 1927-2173 bp Feature: domain Description: RVT_N Location: 1927-2173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2221-2860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2221-2860 bp Feature: domain Description: GIIM Note: maturase Location: 2932-3148 bp Feature: domain Description: GIIM Note: maturase Location: 2932-3148 bp Feature: gene Location: 3179-3550 bp Feature: domain Description: HNHc Note: nucleases Location: 3377-3536 bp Feature: domain Description: HNHc Note: nucleases Location: 3377-3536 bp Feature: gene Location: 3573-3965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3639-3777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3639-3777 bp Feature: domain Description: GIIM Note: maturase Location: 3858-3963 bp Feature: domain Description: GIIM Note: maturase Location: 3858-3963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHIE010000612.1 Moorea sp. SIO4E2 4E2_NODE_612, whole genome shotgun sequence (4028 bp)
Overview 1 RT 1: 1301-3875 bp Neighborhood of RT #1 [1301, 3916] ChoK-like HetN_like_SDR_c RVT-GII GIIM McrA Feature: gene Location: 1301-2248 bp Feature: domain Description: ChoK-like Location: 1454-2030 bp Feature: domain Description: ChoK-like Location: 1454-2030 bp Feature: gene Location: 2256-2618 bp Feature: domain Description: HetN_like_SDR_c Location: 2265-2610 bp Feature: domain Description: HetN_like_SDR_c Location: 2265-2610 bp Feature: gene Location: 2720-3916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2735-3215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2735-3215 bp Feature: domain Description: GIIM Note: maturase Location: 3302-3527 bp Feature: domain Description: GIIM Note: maturase Location: 3302-3527 bp Feature: domain Description: McrA Location: 3575-3875 bp Feature: domain Description: McrA Location: 3575-3875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ChoK-like (cd05151), HetN_like_SDR_c (cd08932), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000701.1 Moorea sp. SIO4E2 4E2_NODE_701, whole genome shotgun sequence (3265 bp)
Overview 1 RT 1: 153-3148 bp Neighborhood of RT #1 [153, 3148] HTH_32 MauG RVT_N RVT-GII GIIM McrA Feature: gene Location: 153-563 bp Feature: domain Description: HTH_32 Location: 210-429 bp Feature: domain Description: HTH_32 Location: 210-429 bp Feature: gene Location: 718-957 bp Feature: domain Description: MauG Location: 754-931 bp Feature: domain Description: MauG Location: 754-931 bp Feature: gene Location: 1046-2728 bp Feature: domain Description: RVT_N Location: 1088-1334 bp Feature: domain Description: RVT_N Location: 1088-1334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1376-2027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1376-20 27 bp Feature: domain Description: GIIM Note: maturase Location: 2114-2339 bp Feature: domain Description: GIIM Note: maturase Location: 2114-2339 bp Feature: domain Description: McrA Location: 2393-2684 bp Feature: domain Description: McrA Location: 2393-2684 bp Feature: gene Location: 2999-3148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), MauG (COG1858), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000715.1 Moorea sp. SIO4E2 4E2_NODE_715, whole genome shotgun sequence (3177 bp)
Overview 1 RT 1: 1-3067 bp Neighborhood of RT #1 [1, 3067] InsQ RVT_N RVT-GII YkfC McrA Feature: gene Location: 1-459 bp Feature: domain Description: InsQ Location: 67-418 bp Feature: domain Description: InsQ Location: 67-418 bp Feature: gene Location: 1075-2820 bp Feature: domain Description: RVT_N Location: 1108-1354 bp Feature: domain Description: RVT_N Location: 1108-1354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1396-2095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1396-2095 bp Feature: domain Description: YkfC Location: 2326-2446 bp Feature: domain Description: YkfC Location: 2326-2446 bp Feature: domain Description: McrA Location: 2527-2794 bp Feature: domain Description: McrA Location: 2527-2794 bp Feature: gene Location: 2801-3067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), McrA (COG4058)

Seq: JAAHIE010000743.1 Moorea sp. SIO4E2 4E2_NODE_743, whole genome shotgun sequence (3013 bp)
Overview 1 RT 1: 2-2961 bp Neighborhood of RT #1 [2, 3011] InsQ RVT-GII GIIM McrA RVT_N RVT-GII InsQ Feature: gene Location: 2-142 bp Feature: gene Location: 179-475 bp Feature: domain Description: InsQ Location: 275-362 bp Feature: domain Description: InsQ Location: 275-362 bp Feature: gene Location: 506-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512-644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512-644 bp Feature: domain Description: GIIM Note: maturase Location: 722-956 bp Feature: domain Description: GIIM Note: maturase Location: 722 -956 bp Feature: domain Description: McrA Location: 1046-1346 bp Feature: domain Description: McrA Location: 1046-1346 bp Feature: gene Location: 1368-2204 bp Feature: domain Description: RVT_N Location: 1413-1659 bp Feature: domain Description: RVT_N Location: 1413-1659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1701-2085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1701-2085 bp Feature: gene Location: 2422-2571 bp Feature: gene Location: 2724-3011 bp Feature: domain Description: InsQ Location: 2733-2961 bp Feature: domain Description: InsQ Location: 2733-2961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHIE010000791.1 Moorea sp. SIO4E2 4E2_NODE_791, whole genome shotgun sequence (2813 bp)
Overview 1 RT 1: 2-2461 bp Neighborhood of RT #1 [2, 2667] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 2-250 bp Feature: gene Location: 757-2667 bp Feature: domain Description: RVT_N Location: 820-1066 bp Feature: domain Description: RVT_N Location: 820-1066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1114-1786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1114-1786 bp Feature: domain Description: GIIM Note: maturase Location: 1858-2089 bp Feature: domain Description: GIIM Note: maturase Location: 1858-2089 bp Feature: domain Description: HNHc Note: nucleases Location: 2299-2461 bp Feature: domain Description: HNHc Note: nucleases Location: 2299-2461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHIE010000820.1 Moorea sp. SIO4E2 4E2_NODE_820, whole genome shotgun sequence (2638 bp)
Overview 1 RT 1: 27-2614 bp Neighborhood of RT #1 [27, 2614] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 27-1535 bp Feature: domain Description: RVT_N Location: 51-297 bp Feature: domain Description: RVT_N Location: 51-297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-942 bp Feature: domain Description: GIIM Note: maturase Location: 999-1179 bp Feature: domain Description: GIIM Note: maturase Location: 999-1179 bp Feature: domain Description: McrA Location: 1191-1500 bp Feature: domain Description: McrA Location: 1191-1500 bp Feature: gene Location: 2384-2614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000827.1 Moorea sp. SIO4E2 4E2_NODE_827, whole genome shotgun sequence (2598 bp)
Overview 1 RT 1: 204-2566 bp Neighborhood of RT #1 [204, 2595] RVT_N RVT-GII RVT-GII GIIM McrA GDE_N GDE_N Feature: gene Location: 204-1715 bp Feature: domain Description: RVT_N Location: 240-483 bp Feature: domain Description: RVT_N Location: 240-483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1131 bp Feature: domain Description: GIIM Note: maturase Location: 1188-1338 bp Feature: domain Description: GIIM Note: maturase Location: 1188-1338 bp Feature: domain Description: McrA Location: 1374-1686 bp Feature: domain Description: McrA Location: 1374-1686 bp Feature: gene Location: 2314-2595 bp Feature: domain Description: GDE_N Location: 2371-2485 bp Feature: domain Description: GDE_N Location: 2371-2485 bp Feature: domain Description: GDE_N Location: 2485-2566 bp Feature: domain Description: GDE_N Location: 2485-25 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), GDE_N (pfam12439)

Seq: JAAHIE010000829.1 Moorea sp. SIO4E2 4E2_NODE_829, whole genome shotgun sequence (2584 bp)
Overview 1 RT 1: 726-2400 bp Neighborhood of RT #1 [726, 2471] RVT_N RVT-GII GIIM McrA Feature: gene Location: 726-2471 bp Feature: domain Description: RVT_N Location: 771-1017 bp Feature: domain Description: RVT_N Location: 771-1017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1059-1710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1059-1710 bp Feature: domain Description: GIIM Note: maturase Location: 1791-2022 bp Feature: domain Description: GIIM Note: maturase Location: 1791-2022 bp Feature: domain Description: McrA Location: 2103-2400 bp Feature: domain Description: McrA Location: 2103-2400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000830.1 Moorea sp. SIO4E2 4E2_NODE_830, whole genome shotgun sequence (2579 bp)
Overview 1 RT 1: 113-2434 bp Neighborhood of RT #1 [113, 2434] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 113-1939 bp Feature: domain Description: RVT_N Location: 176-422 bp Feature: domain Description: RVT_N Location: 176-422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1142 bp Feature: domain Description: GIIM Note: maturase Location: 1214-1448 bp Feature: domain Description: GIIM Note: maturase Location: 1214-1448 bp Feature: domain Description: HNHc Note: nucleases Location: 1664-1826 bp Feature: domain Description: HNHc Note: nucleases Location: 1664-1826 bp Feature: gene Location: 2084-2434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHIE010000839.1 Moorea sp. SIO4E2 4E2_NODE_839, whole genome shotgun sequence (2534 bp)
Overview 1 RT 1: 582-2268 bp Neighborhood of RT #1 [582, 2306] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 582-1034 bp Feature: domain Description: RVT_N Location: 627-873 bp Feature: domain Description: RVT_N Location: 627-873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1017 bp Feature: gene Location: 1080-2306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1671 bp Feature: domain Description: GIIM Note: maturase Location: 1749-1983 bp Feature: domain Description: GIIM Note: maturase Location: 1749-1983 bp Feature: domain Description: McrA Location: 2064-2268 bp Feature: domain Description: McrA Location: 2064-2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000842.1 Moorea sp. SIO4E2 4E2_NODE_842, whole genome shotgun sequence (2507 bp)
Overview 1 RT 1: 565-2281 bp Neighborhood of RT #1 [565, 2412] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 565-2412 bp Feature: domain Description: RVT_N Location: 628-874 bp Feature: domain Description: RVT_N Location: 628-874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1594 bp Feature: domain Description: GIIM Note: maturase Location: 1669-1900 bp Feature: domain Description: GIIM Note: maturase Location: 1669-1900 bp Feature: domain Description: HNHc Note: nucleases Location: 2119-2281 bp Feature: domain Description: HNHc Note: nucleases Location: 2119-2281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHIE010000878.1 Moorea sp. SIO4E2 4E2_NODE_878, whole genome shotgun sequence (2360 bp)
Overview 1 RT 1: 71-2357 bp Neighborhood of RT #1 [71, 2357] RVT_N RVT-GII GIIM Feature: gene Location: 71-1627 bp Feature: domain Description: RVT_N Location: 116-362 bp Feature: domain Description: RVT_N Location: 116-362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1055 bp Feature: domain Description: GIIM Note: maturase Location: 1139-1367 bp Feature: domain Description: GIIM Note: maturase Location: 1139-1367 bp Feature: gene Location: 2106-2357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHIE010000900.1 Moorea sp. SIO4E2 4E2_NODE_900, whole genome shotgun sequence (2301 bp)
Overview 1 RT 1: 115-1591 bp Neighborhood of RT #1 [115, 1635] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 115-1635 bp Feature: domain Description: RVT_N Location: 142-388 bp Feature: domain Description: RVT_N Location: 142-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871-1033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871-1033 bp Feature: domain Description: GIIM Note: maturase Location: 1090-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1090-1264 bp Feature: domain Description: McrA Location: 1294-1591 bp Feature: domain Description: McrA Location: 1294-1591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000907.1 Moorea sp. SIO4E2 4E2_NODE_907, whole genome shotgun sequence (2286 bp)
Overview 1 RT 1: 90-1691 bp Neighborhood of RT #1 [90, 1777] RVT-GII GIIM McrA RVT_N Feature: gene Location: 90-1256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-660 bp Feature: domain Description: GIIM Note: maturase Location: 717-897 bp Feature: domain Description: GIIM Note: maturase Location: 717-897 bp Feature: domain Description: McrA Location: 906-1215 bp Feature: domain Description: McrA Location: 906-1215 bp Feature: gene Location: 1352-1777 bp Feature: domain Description: RVT_N Location: 1445-1691 bp Feature: domain Description: RVT_N Location: 1445-1691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHIE010000924.1 Moorea sp. SIO4E2 4E2_NODE_924, whole genome shotgun sequence (2216 bp)
Overview 1 RT 1: 2-2173 bp Neighborhood of RT #1 [2, 2214] RVT_N RVT-GII RVT-GII RVT-GII GIIM McrA Feature: gene Location: 2-889 bp Feature: domain Description: RVT_N Location: 32-278 bp Feature: domain Description: RVT_N Location: 32-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-887 bp Feature: gene Location: 888-1136 bp Feature: gene Location: 1384-2214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390-1483 bp Feature: domain Description: GIIM Note: maturase Location: 1564-1795 bp Feature: domain Description: GIIM Note: maturase Location: 1564-1795 bp Feature: domain Description: McrA Location: 1894-2173 bp Feature: domain Description: McrA Location: 1894-2173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000935.1 Moorea sp. SIO4E2 4E2_NODE_935, whole genome shotgun sequence (2180 bp)
Overview 1 RT 1: 90-1908 bp Neighborhood of RT #1 [90, 1908] RVT_N RVT-GII GIIM McrA Feature: gene Location: 90-1598 bp Feature: domain Description: RVT_N Location: 120-366 bp Feature: domain Description: RVT_N Location: 120-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1011 bp Feature: domain Description: GIIM Note: maturase Location: 1074-1260 bp Feature: domain Description: GIIM Note: maturase Location: 1074-1260 bp Feature: domain Description: McrA Location: 1335-1572 bp Feature: domain Description: McrA Location: 1335-1572 bp Feature: gene Location: 1747-1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000937.1 Moorea sp. SIO4E2 4E2_NODE_937, whole genome shotgun sequence (2175 bp)
Overview 1 RT 1: 79-2073 bp Neighborhood of RT #1 [79, 2073] RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 79-1590 bp Feature: domain Description: RVT_N Location: 106-352 bp Feature: domain Description: RVT_N Location: 106-35 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832-997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832-997 bp Feature: domain Description: McrA Location: 1252-1555 bp Feature: domain Description: McrA Location: 1252-1555 bp Feature: gene Location: 1864-2073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHIE010000941.1 Moorea sp. SIO4E2 4E2_NODE_941, whole genome shotgun sequence (2155 bp)
Overview 1 RT 1: 556-2038 bp Neighborhood of RT #1 [556, 2067] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 556-2067 bp Feature: domain Description: RVT_N Location: 592-835 bp Feature: domain Description: RVT_N Location: 592-835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1318-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1318-1483 bp Feature: domain Description: GIIM Note: maturase Location: 1540-1693 bp Feature: domain Description: GIIM Note: maturase Location: 1540-1693 bp Feature: domain Description: McrA Location: 1738-2038 bp Feature: domain Description: McrA Location: 1738-2038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHIE010000964.1 Moorea sp. SIO4E2 4E2_NODE_964, whole genome shotgun sequence (2104 bp)
Overview 1 RT 1: 3-2029 bp Neighborhood of RT #1 [3, 2043] RVT_N RVT-GII InsQ Feature: gene Location: 3-470 bp Feature: domain Description: RVT_N Location: 42-288 bp Feature: domain Description: RVT_N Location: 42-288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-471 bp Feature: gene Location: 597-809 bp Feature: gene Location: 1051-2043 bp Feature: domain Description: InsQ Location: 1054-2029 bp Feature: domain Description: InsQ Location: 1054-2029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, InsQ (COG0675)