myRT

myRT report for GCA_010672045.1_ASM1067204v1

Download annotations/find similar RTs

Seq: JAAHHY010001013.1 Moorea sp. SIO4A3 4A3_NODE_1013, whole genome shotgun sequence (4119 bp)
Overview 1 RT 1: 310-4117 bp Neighborhood of RT #1 [310, 4117] RVT-UG25 Feature: gene Location: 310-1890 bp Feature: gene Location: 1891-3375 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 1903-2209 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 1 903-2209 bp Feature: gene Location: 3908-4117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25

Seq: JAAHHY010001060.1 Moorea sp. SIO4A3 4A3_NODE_1060, whole genome shotgun sequence (3975 bp)
Overview 1 RT 1: 331-3330 bp Neighborhood of RT #1 [331, 3330] RVT_N RVT-GII RVT-GII Feature: gene Location: 331-525 bp Feature: gene Location: 685-1020 bp Feature: gene Location: 1532-2440 bp Feature: domain Description: RVT_N Location: 1556-1802 bp Feature: domain Description: RVT_N Location: 1556-1802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-2279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-2 2 79 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2282-2438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 82 -2 438 bp Feature: gene Location: 3004-3330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHY010001081.1 Moorea sp. SIO4A3 4A3_NODE_1081, whole genome shotgun sequence (3901 bp)
Overview 1 RT 1: 2-3618 bp Neighborhood of RT #1 [2, 3618] RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 2-214 bp Feature: gene Location: 379-861 bp Feature: gene Location: 982-2001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006-13 99 bp Feature: domain Description: GIIM Note: maturase Location: 1456-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1456-1615 bp Feature: domain Description: McrA Location: 1663-1954 bp Feature: domain Description: McrA Location: 1663 -1954 bp Feature: gene Location: 2048-2512 bp Feature: domain Description: RVT_N Location: 2084-2327 bp Feature: domain Description: RVT_N Location: 2084-23 27 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2381-2456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 81-2456 bp Feature: gene Location: 3343-3618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHY010001097.1 Moorea sp. SIO4A3 4A3_NODE_1097, whole genome shotgun sequence (3853 bp)
Overview 1 RT 1: 2-3852 bp Neighborhood of RT #1 [2, 3852] TauE RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 2-532 bp Feature: domain Description: TauE Location: 14-530 bp Feature: domain Description: TauE Location: 14 -530 bp Feature: gene Location: 725-1372 bp Feature: gene Location: 1529-2278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1532-1676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1532-1676 bp Feature: domain Description: GIIM Note: maturase Location: 1733-1892 bp Feature: domain Description: GIIM Note: maturase Location: 1733-1892 bp Feature: domain Description: McrA Location: 1949-2231 bp Feature: domain Description: McrA Location: 194 9-2231 bp Feature: gene Location: 2322-3059 bp Feature: domain Description: RVT_N Location: 2358-2601 bp Feature: domain Description: RVT_N Location: 2358-2601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2655-3036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2655-3036 bp Feature: gene Location: 3712-3852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TauE (pfam01925), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHY010001101.1 Moorea sp. SIO4A3 4A3_NODE_1101, whole genome shotgun sequence (3843 bp)
Overview 1 RT 1: 123-3698 bp Neighborhood of RT #1 [123, 3698] XisI-like InsQ RVT_N RVT-GII GIIM McrA Feature: gene Location: 123-449 bp Feature: domain Description: XisI-like Location: 135-444 bp Feature: domain Description: XisI-like Location: 135 -444 bp Feature: gene Location: 672-1208 bp Feature: domain Description: InsQ Location: 684-984 bp Feature: domain Description: InsQ Location: 684-984 bp Feature: gene Location: 1473-3104 bp Feature: domain Description: RVT_N Location: 1479-1632 bp Feature: domain Description: RVT_N Location: 1479-1632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1674-2343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1674-2343 bp Feature: domain Description: GIIM Note: maturase Location: 2421-2655 bp Feature: domain Description: GIIM Note: maturase Location: 2421-265 5 bp Feature: domain Description: McrA Location: 2772-3045 bp Feature: domain Description: McrA Location: 2772-3045 bp Feature: gene Location: 3059-3382 bp Feature: gene Location: 3534-3698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XisI-like (cl07462), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHY010001167.1 Moorea sp. SIO4A3 4A3_NODE_1167, whole genome shotgun sequence (3683 bp)
Overview 1 RT 1: 1-3223 bp Neighborhood of RT #1 [1, 3240] McrA RVT_N RVT-GII RVT-GII Def Feature: gene Location: 1-183 bp Feature: gene Location: 205-624 bp Feature: domain Description: McrA Location: 307-589 bp Feature: domain Description: McrA Location: 307-589 bp Feature: gene Location: 906-1826 bp Feature: domain Description: RVT_N Location: 942-1188 bp Feature: domain Description: RVT_N Location: 942-1188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239-1665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239-16 6 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1668-1824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 6 8-1824 bp Feature: gene Location: 2262-2522 bp Feature: gene Location: 2704-3240 bp Feature: domain Description: Def Location: 2722-3223 bp Feature: domain Description: Def Location: 2722-3223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII, Def (COG0242)

Seq: JAAHHY010001190.1 Moorea sp. SIO4A3 4A3_NODE_1190, whole genome shotgun sequence (3640 bp)
Overview 1 RT 1: 2-3120 bp Neighborhood of RT #1 [2, 3120] RVT-UG4 DUF4157 Feature: gene Location: 2-148 bp Feature: gene Location: 540-1610 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 915-1368 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 915-1368 bp Feature: gene Location: 2203-2625 bp Feature: domain Description: DUF4157 Location: 2212-2368 bp Feature: domain Description: DUF4157 Location: 2212-2368 bp Feature: gene Location: 2632-3120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF4157 (pfam13699)

Seq: JAAHHY010001222.1 Moorea sp. SIO4A3 4A3_NODE_1222, whole genome shotgun sequence (3563 bp)
Overview 1 RT 1: 3-3103 bp Neighborhood of RT #1 [3, 3144] OrfB_Zn_ribbon RVT_N RVT-GII GIIM McrA Feature: gene Location: 3-344 bp Feature: gene Location: 620-805 bp Feature: domain Description: OrfB_Zn_ribbon Location: 638-749 bp Feature: domain Description: OrfB_Zn_ribbon Location: 638 -749 bp Feature: gene Location: 1459-3144 bp Feature: domain Description: RVT_N Location: 1504-1750 bp Feature: domain Description: RVT_N Location: 1504-1750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1792-2443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1792-2443 bp Feature: domain Description: GIIM Note: maturase Location: 2530-2755 bp Feature: domain Description: GIIM Note: maturase Location: 2530-2755 bp Feature: domain Description: McrA Location: 2812-3103 bp Feature: domain Description: McrA Location: 28 12-3103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OrfB_Zn_ribbon (pfam07282), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHY010001224.1 Moorea sp. SIO4A3 4A3_NODE_1224, whole genome shotgun sequence (3560 bp)
Overview 1 RT 1: 205-3217 bp Neighborhood of RT #1 [205, 3234] RRXRR HNHc GIIM McrA RVT-GII RVT_N RVT-GII RRXRR Feature: gene Location: 205-534 bp Feature: domain Description: RRXRR Location: 208-328 bp Feature: domain Description: RRXRR Location: 208-328 bp Feature: domain Description: HNHc Note: nucleases Location: 349-499 bp Feature: domain Description: HNHc Note: nucleases Location: 349 -49 9 bp Feature: gene Location: 873-1409 bp Feature: domain Description: GIIM Note: maturase Location: 888-1035 bp Feature: domain Description: GIIM Note: maturase Location: 888-1035 bp Feature: domain Description: McrA Location: 1077-1347 bp Feature: domain Description: McrA Location: 1077-1347 bp Feature: gene Location: 1598-1738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1601-1736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1601-1736 bp Feature: gene Location: 2098-2520 bp Feature: domain Description: RVT_N Location: 2125-2371 bp Feature: domain Description: RVT_N Location: 2125-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2422-2491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2422-249 1 bp Feature: gene Location: 2744-2887 bp Feature: gene Location: 3085-3234 bp Feature: domain Description: RRXRR Location: 3094-3217 bp Feature: domain Description: RRXRR Location: 309 4-3217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RRXRR (pfam14239), HNHc (smart00507), GIIM (pfam08388), McrA (COG4058), RVT-GII, RVT_N (pfam13655)

Seq: JAAHHY010001251.1 Moorea sp. SIO4A3 4A3_NODE_1251, whole genome shotgun sequence (3497 bp)
Overview 1 RT 1: 227-3492 bp Neighborhood of RT #1 [227, 3494] RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 227-433 bp Feature: gene Location: 996-1175 bp Feature: domain Description: RVT_N Location: 1002-1089 bp Feature: domain Description: RVT_N Location: 10 02-10 89 bp Feature: gene Location: 1271-1675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277-1652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277-1652 bp Feature: gene Location: 1719-1859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1722-1857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1722-1857 bp Feature: gene Location: 2036-2551 bp Feature: domain Description: GIIM Note: maturase Location: 2051-2198 bp Feature: domain Description: GIIM Note: maturase Location: 2051-2198 bp Feature: domain Description: McrA Location: 2204-2519 bp Feature: domain Description: McrA Location: 2204-2519 bp Feature: gene Location: 3117-3494 bp Feature: domain Description: RVT_N Location: 3120-3225 bp Feature: domain Description: RVT_N Location: 3120-3225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276-3492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276-3492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHY010001302.1 Moorea sp. SIO4A3 4A3_NODE_1302, whole genome shotgun sequence (3383 bp)
Overview 1 RT 1: 1791-3264 bp Neighborhood of RT #1 [1791, 3380] RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 1791-2009 bp Feature: domain Description: RVT_N Location: 1815-1932 bp Feature: domain Description: RVT_N Location: 1815-1932 bp Feature: gene Location: 2041-2700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2113-2536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211 3-2536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2545-2698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2545-2698 bp Feature: gene Location: 3000-3380 bp Feature: domain Description: McrA Location: 3057-3264 bp Feature: domain Description: McrA Location: 3057-3264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHY010001417.1 Moorea sp. SIO4A3 4A3_NODE_1417, whole genome shotgun sequence (3190 bp)
Overview 1 RT 1: 106-2696 bp Neighborhood of RT #1 [106, 3187] RVT_N RVT-GII RVT-GII SSL2 Feature: gene Location: 106-1032 bp Feature: domain Description: RVT_N Location: 142-388 bp Feature: domain Description: RVT_N Location: 142-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 874-1030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 874-1030 bp Feature: gene Location: 1693-2217 bp Feature: gene Location: 2174-3187 bp Feature: domain Description: SSL2 Location: 2306-2696 bp Feature: domain Description: SSL2 Location: 2306-2696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, SSL2 (COG1061)

Seq: JAAHHY010001498.1 Moorea sp. SIO4A3 4A3_NODE_1498, whole genome shotgun sequence (3053 bp)
Overview 1 RT 1: 907-3050 bp Neighborhood of RT #1 [907, 3050] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 907-2736 bp Feature: domain Description: RVT_N Location: 970-1216 bp Feature: domain Description: RVT_N Location: 970-1216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264-1930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264-1930 bp Feature: domain Description: GIIM Note: maturase Location: 2005-2236 bp Feature: domain Description: GIIM Note: maturase Location: 2005-2236 bp Feature: domain Description: HNHc Note: nucleases Location: 2443-2608 bp Feature: domain Description: HNHc Note: nucleases Location: 2443-2608 bp Feature: gene Location: 2823-3050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHY010000177.1 Moorea sp. SIO4A3 4A3_NODE_177, whole genome shotgun sequence (10858 bp)
Overview 1 RT 1: 2844-6816 bp Neighborhood of RT #1 [2844, 6816] RVT-GII group_II_RT_mat HNHc RVT_N RVT-GII Feature: gene Location: 2844-3131 bp Feature: gene Location: 3257-3604 bp Feature: gene Location: 3930-4994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3960-4173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3960-4173 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4305-4548 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4305-4548 bp Feature: domain Description: HNHc Note: nucleases Location: 4806-4968 bp Feature: domain Description: HNHc Note: nucleases Location: 4806-4968 bp Feature: gene Location: 5011-5772 bp Feature: domain Description: RVT_N Location: 5053-5311 bp Feature: domain Description: RVT_N Location: 5053-5311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5353-5740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5353-5740 bp Feature: gene Location: 5862-6020 bp Feature: gene Location: 6490-6816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHY010000200.1 Moorea sp. SIO4A3 4A3_NODE_200, whole genome shotgun sequence (10352 bp)
Overview 1 RT 1: 2854-8883 bp Neighborhood of RT #1 [2854, 8883] InsQ RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 2854-3954 bp Feature: domain Description: InsQ Location: 2941-3901 bp Feature: domain Description: InsQ Location: 2941-3901 bp Feature: gene Location: 4522-4743 bp Feature: domain Description: RVT_N Location: 4567-4732 bp Feature: domain Description: RVT_N Location: 4567-4732 bp Feature: gene Location: 5046-5279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5052-5244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5052-5244 bp Feature: gene Location: 5383-6282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5386-5521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5386-5521 bp Feature: domain Description: GIIM Note: maturase Location: 5599-5833 bp Feature: domain Description: GIIM Note: maturase Location: 5599-5833 bp Feature: domain Description: McrA Location: 5914-6211 bp Feature: domain Description: McrA Location: 5914-6211 bp Feature: gene Location: 6973-8016 bp Feature: domain Description: RVT_N Location: 7132-7378 bp Feature: domain Description: RVT_N Location: 7132-7378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7429-7855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7429-7855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7858-8014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7858-8014 bp Feature: gene Location: 8302-8733 bp Feature: domain Description: McrA Location: 8377-8686 bp Feature: domain Description: McrA Location: 8377-8686 bp Feature: gene Location: 8746-8883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHY010000270.1 Moorea sp. SIO4A3 4A3_NODE_270, whole genome shotgun sequence (8890 bp)
Overview 1 RT 1: 6430-8642 bp Neighborhood of RT #1 [6430, 8887] RVT-Retrons Feature: gene Location: 6430-6798 bp Feature: gene Location: 6800-7516 bp Feature: gene Location: 7700-8887 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8021-8642 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8021-8642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAAHHY010000031.1 Moorea sp. SIO4A3 4A3_NODE_31, whole genome shotgun sequence (51525 bp)
Overview 1 RT 1: 43523-47907 bp Neighborhood of RT #1 [43523, 47954] DUF4157 RVT-UG4 DUF4157 Ribonuclease Feature: gene Location: 43523-45217 bp Feature: domain Description: DUF4157 Location: 43814-44009 bp Feature: domain Description: DUF4157 Location: 43814-44009 bp Feature: gene Location: 45389-45817 bp Feature: gene Location: 45922-46284 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45979-46228 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45979-46228 bp Feature: gene Location: 46421-46705 bp Feature: gene Location: 46836-47954 bp Feature: domain Description: DUF4157 Location: 47298-47532 bp Feature: domain Description: DUF4157 Location: 47298-47532 bp Feature: domain Description: Ribonuclease Location: 47694-47907 bp Feature: domain Description: Ribonuclease Location: 47694-47907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4157 (pfam13699), RVT-UG4, Ribonuclease (pfam00545)

Seq: JAAHHY010000390.1 Moorea sp. SIO4A3 4A3_NODE_390, whole genome shotgun sequence (7240 bp)
Overview 1 RT 1: 3490-6820 bp Neighborhood of RT #1 [3490, 6864] RVT_N RVT-GII GIIM HNH Feature: gene Location: 3490-3690 bp Feature: gene Location: 4214-4459 bp Feature: gene Location: 5188-6864 bp Feature: domain Description: RVT_N Location: 5224-5470 bp Feature: domain Description: RVT_N Location: 5224-5470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5512-6163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5512-6163 bp Feature: domain Description: GIIM Note: maturase Location: 6244-6475 bp Feature: domain Description: GIIM Note: maturase Location: 6244-6475 bp Feature: domain Description: HNH Note: nucleases Location: 6688-6820 bp Feature: domain Description: HNH Note: nucleases Location: 6688-6820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHY010000435.1 Moorea sp. SIO4A3 4A3_NODE_435, whole genome shotgun sequence (6854 bp)
Overview 1 RT 1: 2-2961 bp Neighborhood of RT #1 [2, 2961] RVT_N RVT-GII McrA Feature: gene Location: 2-394 bp Feature: gene Location: 888-1832 bp Feature: domain Description: RVT_N Location: 924-1170 bp Feature: domain Description: RVT_N Location: 924-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221-1830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221-1830 bp Feature: gene Location: 2148-2528 bp Feature: domain Description: McrA Location: 2193-2502 bp Feature: domain Description: McrA Location: 219 3-2502 bp Feature: gene Location: 2659-2961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHY010000557.1 Moorea sp. SIO4A3 4A3_NODE_557, whole genome shotgun sequence (5994 bp)
Overview 1 RT 1: 3-4799 bp Neighborhood of RT #1 [3, 4921] RVT_N RVT-GII GIIM HNHc tspaseT_teng_C OrfB_Zn_ribbon Feature: gene Location: 3-266 bp Feature: gene Location: 1098-1232 bp Feature: gene Location: 1858-3693 bp Feature: domain Description: RVT_N Location: 1921-2167 bp Feature: domain Description: RVT_N Location: 1921-2167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2215-2887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2215-2887 bp Feature: domain Description: GIIM Note: maturase Location: 2959-3193 bp Feature: domain Description: GIIM Note: maturase Location: 2959-3193 bp Feature: domain Description: HNHc Note: nucleases Location: 3400-3565 bp Feature: domain Description: HNHc Note: nucleases Location: 3400-3565 bp Feature: gene Location: 3749-4921 bp Feature: domain Description: tspaseT_teng_C Location: 4376-4616 bp Feature: domain Description: tspaseT_teng_C Location: 4376-4616 bp Feature: domain Description: OrfB_Zn_ribbon Location: 4715-4799 bp Feature: domain Description: OrfB_Zn_ribbon Location: 4715-4799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), tspaseT_teng_C (TIGR01766), OrfB_Zn_ribbon (pfam07282)

Seq: JAAHHY010000572.1 Moorea sp. SIO4A3 4A3_NODE_572, whole genome shotgun sequence (5882 bp)
Overview 1 RT 1: 1-3217 bp Neighborhood of RT #1 [1, 3237] RVT_N RVT-GII GIIM InsQ RAYT Feature: gene Location: 1-1236 bp Feature: domain Description: RVT_N Location: 46-292 bp Feature: domain Description: RVT_N Location: 46-292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-985 bp Feature: domain Description: GIIM Note: maturase Location: 1069-1210 bp Feature: domain Description: GIIM Note: maturase Location: 1069-121 0 bp Feature: gene Location: 1745-2866 bp Feature: domain Description: InsQ Location: 1748-2798 bp Feature: domain Description: InsQ Location: 1748-2798 bp Feature: gene Location: 2923-3237 bp Feature: domain Description: RAYT Location: 2932-3217 bp Feature: domain Description: RAYT Location: 2932-321 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), InsQ (COG0675), RAYT (COG1943)

Seq: JAAHHY010000587.1 Moorea sp. SIO4A3 4A3_NODE_587, whole genome shotgun sequence (5830 bp)
Overview 1 RT 1: 1847-5816 bp Neighborhood of RT #1 [1847, 5827] YvlD RVT_N RVT-GII RVT-GII GIIM McrA YjbI Feature: gene Location: 1847-1987 bp Feature: gene Location: 1992-2342 bp Feature: domain Description: YvlD Location: 1995-2331 bp Feature: domain Description: YvlD Location: 1995-2331 bp Feature: gene Location: 3297-4865 bp Feature: domain Description: RVT_N Location: 3324-3570 bp Feature: domain Description: RVT_N Location: 3324-3570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3621-4047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3621-4047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4050-4215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4050-4215 bp Feature: domain Description: GIIM Note: maturase Location: 4272-4464 bp Feature: domain Description: GIIM Note: maturase Location: 4272-4464 bp Feature: domain Description: McrA Location: 4473-4773 bp Feature: domain Description: McrA Location: 4473-4773 bp Feature: gene Location: 5432-5827 bp Feature: domain Description: YjbI Location: 5525-5816 bp Feature: domain Description: YjbI Location: 5525-5816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YvlD (COG1950), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), YjbI (COG2346)

Seq: JAAHHY010000705.1 Moorea sp. SIO4A3 4A3_NODE_705, whole genome shotgun sequence (5241 bp)
Overview 1 RT 1: 464-4117 bp Neighborhood of RT #1 [464, 4137] RVT_N RVT-GII RVT-GII GIIM STKc_TLK YfmG Feature: gene Location: 464-1228 bp Feature: domain Description: RVT_N Location: 512-758 bp Feature: domain Description: RVT_N Location: 512-758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1187 bp Feature: gene Location: 1245-2021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260-1452 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1764 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1764 bp Feature: gene Location: 2470-2685 bp Feature: gene Location: 3214-4137 bp Feature: domain Description: STKc_TLK Location: 3313-3703 bp Feature: domain Description: STKc_TLK Location: 3313-3703 bp Feature: domain Description: YfmG Location: 3706-4117 bp Feature: domain Description: YfmG Location: 3706-4117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), STKc_TLK (cd13990), YfmG (COG1262)

Seq: JAAHHY010000772.1 Moorea sp. SIO4A3 4A3_NODE_772, whole genome shotgun sequence (4927 bp)
Overview 1 RT 1: 177-4471 bp Neighborhood of RT #1 [177, 4471] RVT-GII GIIM McrA RVT-GII RVT_N RVT-GII RVT-GII GIIM McrA RVT_N Feature: gene Location: 177-965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180-324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180-324 bp Feature: domain Description: GIIM Note: maturase Location: 381-564 bp Feature: domain Description: GIIM Note: maturase Location: 381-564 bp Feature: domain Description: McrA Location: 600-882 bp Feature: domain Description: McrA Location: 600-882 bp Feature: gene Location: 1018-1260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039-124 0 bp Feature: gene Location: 1325-1606 bp Feature: domain Description: RVT_N Location: 1328-1457 bp Feature: domain Description: RVT_N Location: 1328-1457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1508-1592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1508-1592 bp Feature: gene Location: 1824-2942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1827-2349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1827-2349 bp Feature: domain Description: GIIM Note: maturase Location: 2406-2607 bp Feature: domain Description: GIIM Note: maturase Location: 24 06-2607 bp Feature: domain Description: McrA Location: 2625-2907 bp Feature: domain Description: McrA Location: 2625-2907 bp Feature: gene Location: 3140-3334 bp Feature: domain Description: RVT_N Location: 3164-3281 bp Feature: domain Description: RVT_N Location: 3164-3281 bp Feature: gene Location: 4139-4471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHY010000781.1 Moorea sp. SIO4A3 4A3_NODE_781, whole genome shotgun sequence (4892 bp)
Overview 1 RT 1: 1-3290 bp Neighborhood of RT #1 [1, 3290] GIIM HNHc RVT-GII RVT_N RVT-GII Feature: gene Location: 1-276 bp Feature: gene Location: 451-1044 bp Feature: domain Description: GIIM Note: maturase Location: 457-637 bp Feature: domain Description: GIIM Note: maturase Location: 457-637 bp Feature: domain Description: HNHc Note: nucleases Location: 856-1015 bp Feature: domain Description: HNHc Note: nucleases Location: 856-1015 bp Feature: gene Location: 1090-1515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117-1333 bp Feature: gene Location: 1496-2290 bp Feature: domain Description: RVT_N Location: 1538-1793 bp Feature: domain Description: RVT_N Location: 1538-1793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1835-2219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1835-2219 bp Feature: gene Location: 2309-2464 bp Feature: gene Location: 3147-3290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655)

Seq: JAAHHY010000798.1 Moorea sp. SIO4A3 4A3_NODE_798, whole genome shotgun sequence (4819 bp)
Overview 1 RT 1: 743-4650 bp Neighborhood of RT #1 [743, 4661] Ycf19 GIIM McrA RVT_N RVT-GII RVT-GII RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 743-1027 bp Feature: domain Description: Ycf19 Location: 761-1013 bp Feature: domain Description: Ycf19 Location: 761-1013 bp Feature: gene Location: 1229-1771 bp Feature: domain Description: GIIM Note: maturase Location: 1259-1382 bp Feature: domain Description: GIIM Note: maturase Location: 1259-1382 bp Feature: domain Description: McrA Location: 1421-1709 bp Feature: domain Description: McrA Location: 1421-1709 bp Feature: gene Location: 1960-2868 bp Feature: domain Description: RVT_N Location: 1984-2230 bp Feature: domain Description: RVT_N Location: 1984-2230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281-2707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281-2707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2710-2866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2710-2866 bp Feature: gene Location: 3233-4084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3236-3581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3236-3581 bp Feature: domain Description: GIIM Note: maturase Location: 3665-3893 bp Feature: domain Description: GIIM Note: maturase Location: 3665-3893 bp Feature: gene Location: 4311-4661 bp Feature: domain Description: RVT_N Location: 4317-4524 bp Feature: domain Description: RVT_N Location: 4317-4524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4566-4650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4566-4650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ycf19 (COG0762), GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), RVT-GII

Seq: JAAHHY010000919.1 Moorea sp. SIO4A3 4A3_NODE_919, whole genome shotgun sequence (4394 bp)
Overview 1 RT 1: 3-4355 bp Neighborhood of RT #1 [3, 4393] RVT-GII GIIM HNH RVT_N RVT-GII FimT Pilin_GH TPR Spy Feature: gene Location: 3-137 bp Feature: gene Location: 234-1232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237-564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237-564 bp Feature: domain Description: GIIM Note: maturase Location: 645-876 bp Feature: domain Description: GIIM Note: maturase Location: 645-876 bp Feature: domain Description: HNH Note: nucleases Location: 1086-1221 bp Feature: domain Description: HNH Note: nucleases Location: 1086-1221 bp Feature: gene Location: 1459-1887 bp Feature: domain Description: RVT_N Location: 1504-1750 bp Feature: domain Description: RVT_N Location: 1504-1750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1792-1876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1792-1876 bp Feature: gene Location: 2652-3239 bp Feature: domain Description: FimT Location: 2694-2811 bp Feature: domain Description: FimT Location: 2694-2811 bp Feature: domain Description: Pilin_GH Location: 2814-3177 bp Feature: domain Description: Pilin_GH Location: 2814-3177 bp Feature: gene Location: 3431-4393 bp Feature: domain Description: TPR Location: 3440-3620 bp Feature: domain Description: TPR Location: 3440-3620 bp Feature: domain Description: Spy Location: 3692-4355 bp Feature: domain Description: Spy Location: 3692-4355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), RVT_N (pfam13655), FimT (COG4970), Pilin_GH (pfam16734), TPR (smart00028), Spy (COG3914)

Seq: JAAHHY010000934.1 Moorea sp. SIO4A3 4A3_NODE_934, whole genome shotgun sequence (4359 bp)
Overview 1 RT 1: 1560-4068 bp Neighborhood of RT #1 [1560, 4268] RVT_N RVT-GII GIIM McrA tspaseT_teng_C Feature: gene Location: 1560-1754 bp Feature: gene Location: 2041-2400 bp Feature: domain Description: RVT_N Location: 2068-2314 bp Feature: domain Description: RVT_N Location: 2068-2314 bp Feature: gene Location: 2496-3068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2502-3066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2502-3066 bp Feature: gene Location: 3261-3764 bp Feature: domain Description: GIIM Note: maturase Location: 3285-3426 bp Feature: domain Description: GIIM Note: maturase Location: 328 5-3426 bp Feature: domain Description: McrA Location: 3474-3738 bp Feature: domain Description: McrA Location: 3474-3738 bp Feature: gene Location: 3846-4268 bp Feature: domain Description: tspaseT_teng_C Location: 3849-4068 bp Feature: domain Description: tspaseT_teng_C Location: 3849-4068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), tspaseT_teng_C (TIGR01766)