myRT

myRT report for GCA_010672065.1_ASM1067206v1

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Seq: JAAHHX010001028.1 Moorea sp. SIO4A1 4A1_NODE_1028, whole genome shotgun sequence (1069 bp)
Overview 1 RT 1: 100-940 bp Neighborhood of RT #1 [100, 1068] RVT-GII GIIM HNHc Feature: gene Location: 100-1068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103-262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03-262 bp Feature: domain Description: GIIM Note: maturase Location: 334-568 bp Feature: domain Description: GIIM Note: maturase Location: 334-568 bp Feature: domain Description: HNHc Note: nucleases Location: 775-940 bp Feature: domain Description: HNHc Note: nucleases Location: 775-940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010001072.1 Moorea sp. SIO4A1 4A1_NODE_1072, whole genome shotgun sequence (1023 bp)
Overview 1 RT 1: 2-973 bp Neighborhood of RT #1 [2, 1020] RVT-GII GIIM McrA Feature: gene Location: 2-136 bp Feature: gene Location: 163-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169-415 bp Feature: domain Description: GIIM Note: maturase Location: 472-604 bp Feature: domain Description: GIIM Note: maturase Location: 472 -604 bp Feature: domain Description: McrA Location: 676-973 bp Feature: domain Description: McrA Location: 676-973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000114.1 Moorea sp. SIO4A1 4A1_NODE_114, whole genome shotgun sequence (11544 bp)
Overview 1 RT 1: 6110-9396 bp Neighborhood of RT #1 [6110, 9410] ABC_6TM_HetC_like McrA RVT_N RVT-GII GIIM ABC_6TM_HetC_like Feature: gene Location: 6110-6442 bp Feature: domain Description: ABC_6TM_HetC_like Location: 6113-6383 bp Feature: domain Description: ABC_6TM_HetC_like Location: 6113 -63 83 bp Feature: gene Location: 6591-6956 bp Feature: domain Description: McrA Location: 6648-6915 bp Feature: domain Description: McrA Location: 6648-6915 bp Feature: gene Location: 7038-8291 bp Feature: domain Description: RVT_N Location: 7074-7320 bp Feature: domain Description: RVT_N Location: 7074-73 20 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7362-8013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 62-8013 bp Feature: domain Description: GIIM Note: maturase Location: 8097-8235 bp Feature: domain Description: GIIM Note: maturase Location: 8097-823 5 bp Feature: gene Location: 8532-8717 bp Feature: gene Location: 8868-9410 bp Feature: domain Description: ABC_6TM_HetC_like Location: 8892-9396 bp Feature: domain Description: ABC_6TM_HetC_like Location: 8892-93 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_6TM_HetC_like (cd18568), McrA (COG4058), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHX010000151.1 Moorea sp. SIO4A1 4A1_NODE_151, whole genome shotgun sequence (4761 bp)
Overview 1 RT 1: 554-3980 bp Neighborhood of RT #1 [554, 3980] RVT_N RVT-GII RVT-GII Feature: gene Location: 554-748 bp Feature: gene Location: 908-1243 bp Feature: gene Location: 1755-2663 bp Feature: domain Description: RVT_N Location: 1779-2025 bp Feature: domain Description: RVT_N Location: 1779-2025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2076-2502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2076-2502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2505-2661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2505-2661 bp Feature: gene Location: 3080-3301 bp Feature: gene Location: 3624-3980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHX010000152.1 Moorea sp. SIO4A1 4A1_NODE_152, whole genome shotgun sequence (4632 bp)
Overview 1 RT 1: 238-4428 bp Neighborhood of RT #1 [238, 4556] Y1_Tnp OrfB_IS605 RVT_N RVT-GII RVT-GII GIIM HNHc InsQ Feature: gene Location: 238-651 bp Feature: domain Description: Y1_Tnp Location: 292-640 bp Feature: domain Description: Y1_Tnp Location: 292-640 bp Feature: gene Location: 720-1652 bp Feature: domain Description: OrfB_IS605 Location: 1350-1644 bp Feature: domain Description: OrfB_IS605 Location: 135 0-1644 bp Feature: gene Location: 2217-2675 bp Feature: domain Description: RVT_N Location: 2274-2520 bp Feature: domain Description: RVT_N Location: 2274-25 20 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2562-2646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 62-2646 bp Feature: gene Location: 2764-3975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2770-3229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2770-3229 bp Feature: domain Description: GIIM Note: maturase Location: 3307-3541 bp Feature: domain Description: GIIM Note: maturase Location: 3307-35 41 bp Feature: domain Description: HNHc Note: nucleases Location: 3757-3910 bp Feature: domain Description: HNHc Note: nucleases Location: 375 7-3910 bp Feature: gene Location: 4113-4556 bp Feature: domain Description: InsQ Location: 4119-4428 bp Feature: domain Description: InsQ Location: 4119-4428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), OrfB_IS605 (pfam01385), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHHX010000156.1 Moorea sp. SIO4A1 4A1_NODE_156, whole genome shotgun sequence (4479 bp)
Overview 1 RT 1: 179-1946 bp Neighborhood of RT #1 [179, 2212] RVT_N RVT-GII RVT-GII GIIM McrA DUF4096 Feature: gene Location: 179-1024 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-86 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875-983 bp Feature: gene Location: 1122-1634 bp Feature: domain Description: GIIM Note: maturase Location: 1134-1224 bp Feature: domain Description: GIIM Note: maturase Location: 1134-1224 bp Feature: domain Description: McrA Location: 1311-1596 bp Feature: domain Description: McrA Location: 1311-1596 bp Feature: gene Location: 1796-2212 bp Feature: domain Description: DUF4096 Location: 1835-1946 bp Feature: domain Description: DUF4096 Location: 1835-1946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF4096 (pfam13340)

Seq: JAAHHX010000163.1 Moorea sp. SIO4A1 4A1_NODE_163, whole genome shotgun sequence (4033 bp)
Overview 1 RT 1: 141-3566 bp Neighborhood of RT #1 [141, 3586] DDE_Tnp_1 RVT-GII GIIM McrA Feature: gene Location: 141-1514 bp Feature: domain Description: DDE_Tnp_1 Location: 672-1197 bp Feature: domain Description: DDE_Tnp_1 Location: 67 2-1197 bp Feature: gene Location: 2291-3586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-2897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-2897 bp Feature: domain Description: GIIM Note: maturase Location: 2987-3209 bp Feature: domain Description: GIIM Note: maturase Location: 2987 -3209 bp Feature: domain Description: McrA Location: 3293-3566 bp Feature: domain Description: McrA Location: 3293-3566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000173.1 Moorea sp. SIO4A1 4A1_NODE_173, whole genome shotgun sequence (3754 bp)
Overview 1 RT 1: 130-3536 bp Neighborhood of RT #1 [130, 3536] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 130-288 bp Feature: gene Location: 1210-2871 bp Feature: domain Description: RVT_N Location: 1297-1543 bp Feature: domain Description: RVT_N Location: 1297-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1591-2260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1591-2260 bp Feature: domain Description: GIIM Note: maturase Location: 2332-2563 bp Feature: domain Description: GIIM Note: maturase Location: 2332-2563 bp Feature: domain Description: HNHc Note: nucleases Location: 2770-2869 bp Feature: domain Description: HNHc Note: nucleases Location: 2770-28 69 bp Feature: gene Location: 2980-3348 bp Feature: gene Location: 3351-3536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000176.1 Moorea sp. SIO4A1 4A1_NODE_176, whole genome shotgun sequence (3704 bp)
Overview 1 RT 1: 348-3012 bp Neighborhood of RT #1 [348, 3014] PRK09250 group_II_RT_mat McrA RVT_N RVT-GII Feature: gene Location: 348-566 bp Feature: domain Description: PRK09250 Location: 378-552 bp Feature: domain Description: PRK09 250 Location: 378-552 bp Feature: gene Location: 1386-1928 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1395-1584 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 139 5-1584 bp Feature: domain Description: McrA Location: 1584-1902 bp Feature: domain Description: McrA Location: 1584-19 02 bp Feature: gene Location: 2082-3014 bp Feature: domain Description: RVT_N Location: 2121-2367 bp Feature: domain Description: RVT_N Location: 2121-2367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2418-3012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2418-3012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09250 (class I fructose-bisphosphate aldolase), group_II_RT_mat (TIGR04416), McrA (COG4058), RVT_N (pfam13655), RVT-GII

Seq: JAAHHX010000192.1 Moorea sp. SIO4A1 4A1_NODE_192, whole genome shotgun sequence (3372 bp)
Overview 1 RT 1: 477-3239 bp Neighborhood of RT #1 [477, 3370] DDE_Tnp_IS66 RVT-GII RVT-GII GIIM Feature: gene Location: 477-692 bp Feature: gene Location: 846-2291 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1362-2151 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1362-2151 bp Feature: gene Location: 2342-3370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2402-2822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2402-2822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2831-2996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2831-2996 bp Feature: domain Description: GIIM Note: maturase Location: 3053-3239 bp Feature: domain Description: GIIM Note: maturase Location: 3053-3239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: JAAHHX010000194.1 Moorea sp. SIO4A1 4A1_NODE_194, whole genome shotgun sequence (3345 bp)
Overview 1 RT 1: 785-3344 bp Neighborhood of RT #1 [785, 3344] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 785-2650 bp Feature: domain Description: RVT_N Location: 866-1112 bp Feature: domain Description: RVT_N Location: 866-11 12 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1160-1832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11 60-1832 bp Feature: domain Description: GIIM Note: maturase Location: 1907-2138 bp Feature: domain Description: GIIM Note: maturase Location: 1907-2138 bp Feature: domain Description: HNHc Note: nucleases Location: 2354-2519 bp Feature: domain Description: HNHc Note: nucleases Location: 2354-2519 bp Feature: gene Location: 2896-3078 bp Feature: gene Location: 3192-3344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000199.1 Moorea sp. SIO4A1 4A1_NODE_199, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 3-3249 bp Neighborhood of RT #1 [3, 3284] Nucleos_tra2_C RVT_N RVT-GII GIIM McrA GT4_WbuB-like Feature: gene Location: 3-155 bp Feature: domain Description: Nucleos_tra2_C Location: 6-123 bp Feature: domain Description: Nucleos_tra2_C Location: 6-12 3 bp Feature: gene Location: 321-650 bp Feature: gene Location: 808-2394 bp Feature: domain Description: RVT_N Location: 898-1144 bp Feature: domain Description: RVT_N Location: 898-1144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195-1798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195-1798 bp Feature: domain Description: GIIM Note: maturase Location: 1855-2041 bp Feature: domain Description: GIIM Note: maturase Location: 1855-2041 bp Feature: domain Description: McrA Location: 2050-2353 bp Feature: domain Description: McrA Location: 2050-2353 bp Feature: gene Location: 2502-3284 bp Feature: domain Description: GT4_WbuB-like Location: 2511-3249 bp Feature: domain Description: GT4_WbuB-like Location: 2511-3249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nucleos_tra2_C (pfam07662), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), GT4_WbuB-like (cd03794)

Seq: JAAHHX010000002.1 Moorea sp. SIO4A1 4A1_NODE_2, whole genome shotgun sequence (465969 bp)
Overview 1 RT 1: 101223-105748 bp Neighborhood of RT #1 [101223, 105748] RVT_N RVT-GII GIIM McrA Feature: gene Location: 101223-101663 bp Feature: gene Location: 102040-102306 bp Feature: gene Location: 103049-104587 bp Feature: domain Description: RVT_N Location: 103085-103331 bp Feature: domain Description: RVT_N Location: 103085-103331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103382-103982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103382-103982 bp Feature: domain Description: GIIM Note: maturase Location: 104039-104228 bp Feature: domain Description: GIIM Note: maturase Location: 104039-104228 bp Feature: domain Description: McrA Location: 104258-104540 bp Feature: domain Description: McrA Location: 104258-104540 bp Feature: gene Location: 104674-104901 bp Feature: gene Location: 105497-105748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000022.1 Moorea sp. SIO4A1 4A1_NODE_22, whole genome shotgun sequence (140181 bp)
Overview 1 RT 1: 107-1503 bp 2 RT 2: 28376-36180 bp Neighborhood of RT #1 [107, 1526] RVT-GII GIIM HNHc Neighborhood of RT #2 [28376, 36674] PRK07360 InsQ RVT_N RVT-GII GIIM McrA COG5305 GstA Feature: gene Location: 107-472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-416 bp Feature: gene Location: 620-748 bp Feature: gene Location: 777-1526 bp Feature: domain Description: GIIM Note: maturase Location: 885-1122 bp Feature: domain Description: GIIM Note: maturase Location: 885-1122 bp Feature: domain Description: HNHc Note: nucleases Location: 1341-1503 bp Feature: domain Description: HNHc Note: nucleases Location: 1341-1503 bp Feature: gene Location: 28376-29509 bp Feature: domain Description: PRK07360 Location: 28394-29504 bp Feature: domain Description: PRK07360 Location: 28394-29504 bp Feature: gene Location: 29710-30942 bp Feature: domain Description: InsQ Location: 30157-30838 bp Feature: domain Description: InsQ Location: 30157-30838 bp Feature: gene Location: 31094-32617 bp Feature: domain Description: RVT_N Location: 31133-31379 bp Feature: domain Description: RVT_N Location: 31133-31379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31430-32033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314 30-32033 bp Feature: domain Description: GIIM Note: maturase Location: 32090-32270 bp Feature: domain Description: GIIM Note: maturase Location: 32090-32270 bp Feature: domain Description: McrA Location: 32303-32591 bp Feature: domain Description: McrA Location: 32303-32591 bp Feature: gene Location: 33578-35380 bp Feature: domain Description: COG5305 Location: 33617-35330 bp Feature: domain Description: COG5305 Location: 33617-35330 bp Feature: gene Location: 35466-36674 bp Feature: domain Description: GstA Location: 35607-36180 bp Feature: domain Description: GstA Location: 35607-36180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK07360 (FO synthase subunit 2; Reviewed), InsQ (COG0675), RVT_N (pfam13655), McrA (COG4058), COG5305 (Uncharacterized membrane protein ), GstA (COG0625)

Seq: JAAHHX010000220.1 Moorea sp. SIO4A1 4A1_NODE_220, whole genome shotgun sequence (2947 bp)
Overview 1 RT 1: 112-2945 bp Neighborhood of RT #1 [112, 2944] InsQ InsQ RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 112-750 bp Feature: domain Description: InsQ Location: 199-679 bp Feature: domain Description: InsQ Location: 199-679 bp Feature: gene Location: 725-1003 bp Feature: domain Description: InsQ Location: 728-995 bp Feature: domain Description: InsQ Location: 728-995 bp Feature: gene Location: 1385-2944 bp Feature: domain Description: RVT_N Location: 1568-1814 bp Feature: domain Description: RVT_N Location: 15 68-1814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865-2291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865-2291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-2459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-2459 bp Feature: domain Description: GIIM Note: maturase Location: 2516-2687 bp Feature: domain Description: GIIM Note: maturase Location: 2516-2687 bp Feature: domain Description: McrA Location: 2711-2945 bp Feature: domain Description: McrA Location: 2711-2945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000240.1 Moorea sp. SIO4A1 4A1_NODE_240, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 73-2087 bp Neighborhood of RT #1 [73, 2158] RVT_N RVT-GII GIIM McrA Feature: gene Location: 73-294 bp Feature: gene Location: 416-2158 bp Feature: domain Description: RVT_N Location: 455-701 bp Feature: domain Description: RVT_N Location: 455-701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1394 bp Feature: domain Description: GIIM Note: maturase Location: 1475-1709 bp Feature: domain Description: GIIM Note: maturase Location: 1475-1709 bp Feature: domain Description: McrA Location: 1799-2087 bp Feature: domain Description: McrA Location: 1799-2087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000254.1 Moorea sp. SIO4A1 4A1_NODE_254, whole genome shotgun sequence (2611 bp)
Overview 1 RT 1: 1-2174 bp Neighborhood of RT #1 [1, 2224] GIIM HNHc RVT-GII GIIM McrA Feature: gene Location: 1-810 bp Feature: domain Description: GIIM Note: maturase Location: 79-310 bp Feature: domain Description: GIIM Note: maturase Location: 79-310 bp Feature: domain Description: HNHc Note: nucleases Location: 517-682 bp Feature: domain Description: HNHc Note: nucleases Location: 517 -682 bp Feature: gene Location: 1100-2224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-1478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-1478 bp Feature: domain Description: GIIM Note: maturase Location: 1568-1790 bp Feature: domain Description: GIIM Note: maturase Location: 1568-17 90 bp Feature: domain Description: McrA Location: 1874-2174 bp Feature: domain Description: McrA Location: 1874-217 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, McrA (COG4058)

Seq: JAAHHX010000255.1 Moorea sp. SIO4A1 4A1_NODE_255, whole genome shotgun sequence (2609 bp)
Overview 1 RT 1: 97-2608 bp Neighborhood of RT #1 [97, 2608] RVT-GII GIIM HNHc RVT_N Feature: gene Location: 97-1650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160-832 bp Feature: domain Description: GIIM Note: maturase Location: 904-1138 bp Feature: domain Description: GIIM Note: maturase Location: 904-1138 bp Feature: domain Description: HNHc Note: nucleases Location: 1351-1507 bp Feature: domain Description: HNHc Note: nucleases Location: 1351-1507 bp Feature: gene Location: 1685-1945 bp Feature: domain Description: RVT_N Location: 1748-1910 bp Feature: domain Description: RVT_N Location: 1748-1910 bp Feature: gene Location: 2390-2608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHX010000026.1 Moorea sp. SIO4A1 4A1_NODE_26, whole genome shotgun sequence (118006 bp)
Overview 1 RT 1: 44017-49483 bp Neighborhood of RT #1 [44017, 49497] COG4328 RVT_N RVT-GII GIIM HNHc InsQ COG4328 Feature: gene Location: 44017-44232 bp Feature: gene Location: 44487-44960 bp Feature: domain Description: COG4328 Location: 44490-44952 bp Feature: domain Description: COG4328 Location: 44490-44952 bp Feature: gene Location: 45519-47267 bp Feature: domain Description: RVT_N Location: 45564-45810 bp Feature: domain Description: RVT_N Location: 45564-45810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45852-46551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45852-46551 bp Feature: domain Description: GIIM Note: maturase Location: 46650-46884 bp Feature: domain Description: GIIM Note: maturase Location: 46650-46884 bp Feature: domain Description: HNHc Note: nucleases Location: 47073-47232 bp Feature: domain Description: HNHc Note: nucleases Location: 47073-47232 bp Feature: gene Location: 47477-49183 bp Feature: domain Description: InsQ Location: 48122-49136 bp Feature: domain Description: InsQ Location: 48122-49136 bp Feature: gene Location: 49186-49497 bp Feature: domain Description: COG4328 Location: 49204-49483 bp Feature: domain Description: COG4328 Location: 49204-49483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4328 (Predicted nuclease (RNAse H fold) ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHHX010000265.1 Moorea sp. SIO4A1 4A1_NODE_265, whole genome shotgun sequence (2578 bp)
Overview 1 RT 1: 24-2268 bp Neighborhood of RT #1 [24, 2268] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 24-1934 bp Feature: domain Description: RVT_N Location: 87-333 bp Feature: domain Description: RVT_N Location: 87-333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1053 bp Feature: domain Description: GIIM Note: maturase Location: 1125-1356 bp Feature: domain Description: GIIM Note: maturase Location: 1125-1356 bp Feature: domain Description: HNHc Note: nucleases Location: 1566-1728 bp Feature: domain Description: HNHc Note: nucleases Location: 1566-1728 bp Feature: gene Location: 2080-2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000266.1 Moorea sp. SIO4A1 4A1_NODE_266, whole genome shotgun sequence (2549 bp)
Overview 1 RT 1: 161-2548 bp Neighborhood of RT #1 [161, 2548] RVT_N RVT-GII GIIM McrA Feature: gene Location: 161-1867 bp Feature: domain Description: RVT_N Location: 200-446 bp Feature: domain Description: RVT_N Location: 200-446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488-1139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488-1139 bp Feature: domain Description: GIIM Note: maturase Location: 1226-1451 bp Feature: domain Description: GIIM Note: maturase Location: 1226-1451 bp Feature: domain Description: McrA Location: 1505-1799 bp Feature: domain Description: McrA Location: 1505-1799 bp Feature: gene Location: 2399-2548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000269.1 Moorea sp. SIO4A1 4A1_NODE_269, whole genome shotgun sequence (2537 bp)
Overview 1 RT 1: 597-2310 bp Neighborhood of RT #1 [597, 2441] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 597-2441 bp Feature: domain Description: RVT_N Location: 657-903 bp Feature: domain Description: RVT_N Location: 657-903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1623 bp Feature: domain Description: GIIM Note: maturase Location: 1695-1929 bp Feature: domain Description: GIIM Note: maturase Location: 1695-1929 bp Feature: domain Description: HNHc Note: nucleases Location: 2148-2310 bp Feature: domain Description: HNHc Note: nucleases Location: 2148-2310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000282.1 Moorea sp. SIO4A1 4A1_NODE_282, whole genome shotgun sequence (2469 bp)
Overview 1 RT 1: 143-2245 bp Neighborhood of RT #1 [143, 2289] RVT_N RVT-GII GIIM HNH Feature: gene Location: 143-325 bp Feature: gene Location: 589-2289 bp Feature: domain Description: RVT_N Location: 634-880 bp Feature: domain Description: RVT_N Location: 634-880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1591 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1903 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1903 bp Feature: domain Description: HNH Note: nucleases Location: 2113-2245 bp Feature: domain Description: HNH Note: nucleases Location: 2113-2245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHX010000286.1 Moorea sp. SIO4A1 4A1_NODE_286, whole genome shotgun sequence (2431 bp)
Overview 1 RT 1: 92-2255 bp Neighborhood of RT #1 [92, 2255] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 92-1834 bp Feature: domain Description: RVT_N Location: 155-398 bp Feature: domain Description: RVT_N Location: 155-398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-1103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-1103 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1400 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1400 bp Feature: domain Description: HNHc Note: nucleases Location: 1643-1805 bp Feature: domain Description: HNHc Note: nucleases Location: 1643-1805 bp Feature: gene Location: 2082-2255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000295.1 Moorea sp. SIO4A1 4A1_NODE_295, whole genome shotgun sequence (2383 bp)
Overview 1 RT 1: 113-2359 bp Neighborhood of RT #1 [113, 2359] RVT_N RVT-GII GIIM McrA Feature: gene Location: 113-1795 bp Feature: domain Description: RVT_N Location: 152-398 bp Feature: domain Description: RVT_N Location: 152-398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1094 bp Feature: domain Description: GIIM Note: maturase Location: 1175-1406 bp Feature: domain Description: GIIM Note: maturase Location: 1175-1406 bp Feature: domain Description: McrA Location: 1463-1751 bp Feature: domain Description: McrA Location: 1463-1751 bp Feature: gene Location: 2087-2359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000298.1 Moorea sp. SIO4A1 4A1_NODE_298, whole genome shotgun sequence (2357 bp)
Overview 1 RT 1: 211-2292 bp Neighborhood of RT #1 [211, 2292] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 211-1935 bp Feature: domain Description: RVT_N Location: 256-502 bp Feature: domain Description: RVT_N Location: 256-502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544-1201 bp Feature: domain Description: GIIM Note: maturase Location: 1282-1513 bp Feature: domain Description: GIIM Note: maturase Location: 1282-1513 bp Feature: domain Description: HNHc Note: nucleases Location: 1720-1879 bp Feature: domain Description: HNHc Note: nucleases Location: 1720-1879 bp Feature: gene Location: 2131-2292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000299.1 Moorea sp. SIO4A1 4A1_NODE_299, whole genome shotgun sequence (2350 bp)
Overview 1 RT 1: 113-1755 bp Neighborhood of RT #1 [113, 1766] RVT-GII GIIM HNH RVT_N RVT-GII Feature: gene Location: 113-1111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116-443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116-443 bp Feature: domain Description: GIIM Note: maturase Location: 524-755 bp Feature: domain Description: GIIM Note: maturase Location: 524-755 bp Feature: domain Description: HNH Note: nucleases Location: 965-1100 bp Feature: domain Description: HNH Note: nucleases Location: 965-1100 bp Feature: gene Location: 1338-1766 bp Feature: domain Description: RVT_N Location: 1383-1629 bp Feature: domain Description: RVT_N Location: 1383-1629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1671-1755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1671-1755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), RVT_N (pfam13655)

Seq: JAAHHX010000304.1 Moorea sp. SIO4A1 4A1_NODE_304, whole genome shotgun sequence (2335 bp)
Overview 1 RT 1: 112-2188 bp Neighborhood of RT #1 [112, 2334] McrA RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 112-393 bp Feature: domain Description: McrA Location: 118-352 bp Feature: domain Description: McrA Location: 118-352 bp Feature: gene Location: 596-760 bp Feature: gene Location: 976-2334 bp Feature: domain Description: RVT_N Location: 1096-1342 bp Feature: domain Description: RVT_N Location: 1096-1342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1393-1816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1393-1816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1822-1987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1822-1987 bp Feature: domain Description: GIIM Note: maturase Location: 2050-2188 bp Feature: domain Description: GIIM Note: maturase Location: 2050-2188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHX010000310.1 Moorea sp. SIO4A1 4A1_NODE_310, whole genome shotgun sequence (2309 bp)
Overview 1 RT 1: 148-2095 bp Neighborhood of RT #1 [148, 2095] RVT_N RVT-GII GIIM McrA Feature: gene Location: 148-1671 bp Feature: domain Description: RVT_N Location: 187-430 bp Feature: domain Description: RVT_N Location: 187-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1087 bp Feature: domain Description: GIIM Note: maturase Location: 1144-1324 bp Feature: domain Description: GIIM Note: maturase Location: 1144-1324 bp Feature: domain Description: McrA Location: 1342-1645 bp Feature: domain Description: McrA Location: 1342-1645 bp Feature: gene Location: 1805-2095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000314.1 Moorea sp. SIO4A1 4A1_NODE_314, whole genome shotgun sequence (2295 bp)
Overview 1 RT 1: 244-1751 bp Neighborhood of RT #1 [244, 1774] RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 244-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-391 bp Feature: domain Description: GIIM Note: maturase Location: 448-607 bp Feature: domain Description: GIIM Note: maturase Location: 448-607 bp Feature: domain Description: McrA Location: 664-946 bp Feature: domain Description: McrA Location: 664-946 bp Feature: gene Location: 1037-1774 bp Feature: domain Description: RVT_N Location: 1073-1316 bp Feature: domain Description: RVT_N Location: 1073-1316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370-1751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370-1751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHX010000325.1 Moorea sp. SIO4A1 4A1_NODE_325, whole genome shotgun sequence (2257 bp)
Overview 1 RT 1: 1-1996 bp Neighborhood of RT #1 [1, 1996] RVT_N RVT-GII Feature: gene Location: 1-645 bp Feature: domain Description: RVT_N Location: 40-286 bp Feature: domain Description: RVT_N Location: 40-286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-646 bp Feature: gene Location: 1091-1996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHX010000341.1 Moorea sp. SIO4A1 4A1_NODE_341, whole genome shotgun sequence (2173 bp)
Overview 1 RT 1: 81-2170 bp Neighborhood of RT #1 [81, 2170] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 81-1595 bp Feature: domain Description: RVT_N Location: 105-351 bp Feature: domain Description: RVT_N Location: 105-351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1002 bp Feature: domain Description: GIIM Note: maturase Location: 1059-1245 bp Feature: domain Description: GIIM Note: maturase Location: 1059-1245 bp Feature: domain Description: McrA Location: 1263-1560 bp Feature: domain Description: McrA Location: 1263-1560 bp Feature: gene Location: 1542-1682 bp Feature: gene Location: 2021-2170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000357.1 Moorea sp. SIO4A1 4A1_NODE_357, whole genome shotgun sequence (2094 bp)
Overview 1 RT 1: 32-2093 bp Neighborhood of RT #1 [32, 2093] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 32-1831 bp Feature: domain Description: RVT_N Location: 128-374 bp Feature: domain Description: RVT_N Location: 128-374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1115 bp Feature: domain Description: GIIM Note: maturase Location: 1217-1448 bp Feature: domain Description: GIIM Note: maturase Location: 1217-1448 bp Feature: domain Description: HNHc Note: nucleases Location: 1637-1796 bp Feature: domain Description: HNHc Note: nucleases Location: 1637-1796 bp Feature: gene Location: 1875-2093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000364.1 Moorea sp. SIO4A1 4A1_NODE_364, whole genome shotgun sequence (2060 bp)
Overview 1 RT 1: 1-1642 bp Neighborhood of RT #1 [1, 1725] RVT_N RVT-GII GIIM McrA Feature: gene Location: 1-180 bp Feature: gene Location: 193-1725 bp Feature: domain Description: RVT_N Location: 220-466 bp Feature: domain Description: RVT_N Location: 220-466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-1129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-1129 bp Feature: domain Description: GIIM Note: maturase Location: 1186-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1186-1381 bp Feature: domain Description: McrA Location: 1384-1642 bp Feature: domain Description: McrA Location: 1384-1642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000403.1 Moorea sp. SIO4A1 4A1_NODE_403, whole genome shotgun sequence (1945 bp)
Overview 1 RT 1: 157-1819 bp Neighborhood of RT #1 [157, 1851] RVT_N RVT-GII McrA Feature: gene Location: 157-1149 bp Feature: domain Description: RVT_N Location: 265-511 bp Feature: domain Description: RVT_N Location: 265-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1147 bp Feature: gene Location: 1435-1851 bp Feature: domain Description: McrA Location: 1531-1819 bp Feature: domain Description: McrA Location: 1531-1819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHX010000410.1 Moorea sp. SIO4A1 4A1_NODE_410, whole genome shotgun sequence (1930 bp)
Overview 1 RT 1: 2-1928 bp Neighborhood of RT #1 [2, 1928] RVT-UG4 DUF4157 Feature: gene Location: 2-406 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5-164 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5-164 bp Feature: gene Location: 1092-1421 bp Feature: domain Description: DUF4157 Location: 1101-1257 bp Feature: domain Description: DUF4157 Location: 1101-1257 bp Feature: gene Location: 1428-1928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF4157 (pfam13699)

Seq: JAAHHX010000416.1 Moorea sp. SIO4A1 4A1_NODE_416, whole genome shotgun sequence (1913 bp)
Overview 1 RT 1: 1-1676 bp Neighborhood of RT #1 [1, 1702] RVT_N RVT-GII RVT-GII group_II_RT_mat HNHc Feature: gene Location: 1-588 bp Feature: domain Description: RVT_N Location: 4-160 bp Feature: domain Description: RVT_N Location: 4-160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-586 bp Feature: gene Location: 638-1702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 662-881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 662-881 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1007-1256 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1007-1256 bp Feature: domain Description: HNHc Note: nucleases Location: 1514-1676 bp Feature: domain Description: HNHc Note: nucleases Location: 1514-1676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)

Seq: JAAHHX010000428.1 Moorea sp. SIO4A1 4A1_NODE_428, whole genome shotgun sequence (1903 bp)
Overview 1 RT 1: 3-1867 bp Neighborhood of RT #1 [3, 1902] RVT_N RVT-GII SLC5sbd_PutP Feature: gene Location: 3-719 bp Feature: domain Description: RVT_N Location: 39-279 bp Feature: domain Description: RVT_N Location: 39-279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-720 bp Feature: gene Location: 1351-1902 bp Feature: domain Description: SLC5sbd_PutP Location: 1357-1867 bp Feature: domain Description: SLC5sbd_PutP Location: 1357-1867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, SLC5sbd_PutP (cd11475)

Seq: JAAHHX010000043.1 Moorea sp. SIO4A1 4A1_NODE_43, whole genome shotgun sequence (58020 bp)
Overview 1 RT 1: 25000-29903 bp Neighborhood of RT #1 [25000, 29920] COG4243 RVT_N RVT-GII GIIM McrA TIGR00275 Feature: gene Location: 25000-25992 bp Feature: domain Description: COG4243 Location: 25015-25534 bp Feature: domain Description: COG4243 Location: 25015-25534 bp Feature: gene Location: 26160-26369 bp Feature: gene Location: 26660-27964 bp Feature: domain Description: RVT_N Location: 26705-26951 bp Feature: domain Description: RVT_N Location: 26705-26951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26993-27644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26993-27644 bp Feature: domain Description: GIIM Note: maturase Location: 27725-27875 bp Feature: domain Description: GIIM Note: maturase Location: 27725-27875 bp Feature: gene Location: 28009-28371 bp Feature: domain Description: McrA Location: 28036-28351 bp Feature: domain Description: McrA Location: 28036-28351 bp Feature: gene Location: 28643-29920 bp Feature: domain Description: TIGR00275 Location: 28673-29903 bp Feature: domain Description: TIGR00275 Location: 28673-29903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4243 (Uncharacterized membrane protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), TIGR00275 (flavoprotein, HI0933 family)

Seq: JAAHHX010000476.1 Moorea sp. SIO4A1 4A1_NODE_476, whole genome shotgun sequence (1807 bp)
Overview 1 RT 1: 3-1767 bp Neighborhood of RT #1 [3, 1805] SLC5sbd_PutP RVT-GII RVT-GII McrA Feature: gene Location: 3-773 bp Feature: domain Description: SLC5sbd_PutP Location: 6-771 bp Feature: domain Description: SLC5sbd_PutP Location: 6-771 bp Feature: gene Location: 879-1805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1047-1212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1047-1212 bp Feature: domain Description: McrA Location: 1452-1767 bp Feature: domain Description: McrA Location: 1452-1767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLC5sbd_PutP (cd11475), RVT-GII, McrA (COG4058)

Seq: JAAHHX010000505.1 Moorea sp. SIO4A1 4A1_NODE_505, whole genome shotgun sequence (1756 bp)
Overview 1 RT 1: 179-1574 bp Neighborhood of RT #1 [179, 1609] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 179-1609 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1016 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1253 bp Feature: domain Description: McrA Location: 1283-1574 bp Feature: domain Description: McrA Location: 1283-1574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000523.1 Moorea sp. SIO4A1 4A1_NODE_523, whole genome shotgun sequence (1727 bp)
Overview 1 RT 1: 86-1724 bp Neighborhood of RT #1 [86, 1726] RVT_N RVT-GII Feature: gene Location: 86-331 bp Feature: gene Location: 1226-1726 bp Feature: domain Description: RVT_N Location: 1289-1535 bp Feature: domain Description: RVT_N Location: 1289-1535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1583-1724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1583-1724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHX010000528.1 Moorea sp. SIO4A1 4A1_NODE_528, whole genome shotgun sequence (1716 bp)
Overview 1 RT 1: 130-1687 bp Neighborhood of RT #1 [130, 1713] RVT-GII GIIM McrA Feature: gene Location: 130-402 bp Feature: gene Location: 601-1713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1129 bp Feature: domain Description: GIIM Note: maturase Location: 1186-1366 bp Feature: domain Description: GIIM Note: maturase Location: 1186-1366 bp Feature: domain Description: McrA Location: 1378-1687 bp Feature: domain Description: McrA Location: 1378-1687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000053.1 Moorea sp. SIO4A1 4A1_NODE_53, whole genome shotgun sequence (45426 bp)
Overview 1 RT 1: 3-5761 bp Neighborhood of RT #1 [3, 5799] STKc_PknB_like WD40 WD40 WD40 WD40 WD40 WD40 WD40 InsQ RVT_N RVT-GII GIIM McrA InsQ UPF0175 Feature: gene Location: 3-1193 bp Feature: domain Description: STKc_PknB_like Location: 6-210 bp Feature: domain Description: STKc_PknB_like Location: 6-210 bp Feature: domain Description: WD40 Location: 291-408 bp Feature: domain Description: WD40 Location: 291-408 bp Feature: domain Description: WD40 Location: 426-531 bp Feature: domain Description: WD40 Location: 426-531 bp Feature: domain Description: WD40 Location: 543-657 bp Feature: domain Description: WD40 Location: 543-657 bp Feature: domain Description: WD40 Location: 681-786 bp Feature: domain Description: WD40 Location: 681-786 bp Feature: domain Description: WD40 Location: 795-909 bp Feature: domain Description: WD40 Location: 795-909 bp Feature: domain Description: WD40 Location: 945-1056 bp Feature: domain Description: WD40 Location: 945-1056 bp Feature: domain Description: WD40 Location: 1068-1182 bp Feature: domain Description: WD40 Location: 1068-1182 bp Feature: gene Location: 1370-1762 bp Feature: domain Description: InsQ Location: 1424-1712 bp Feature: domain Description: InsQ Location: 1424-1712 bp Feature: gene Location: 1882-3393 bp Feature: domain Description: RVT_N Location: 1912-2158 bp Feature: domain Description: RVT_N Location: 1912-2158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2209-2806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2209-2806 bp Feature: domain Description: GIIM Note: maturase Location: 2866-3052 bp Feature: domain Description: GIIM Note: maturase Location: 2866-3052 bp Feature: domain Description: McrA Location: 3082-3367 bp Feature: domain Description: McrA Location: 3082-3367 bp Feature: gene Location: 3955-4923 bp Feature: domain Description: InsQ Location: 3958-4906 bp Feature: domain Description: InsQ Location: 3958-4906 bp Feature: gene Location: 5530-5799 bp Feature: domain Description: UPF0175 Location: 5551-5761 bp Feature: domain Description: UPF0175 Location: 5551-5761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), WD40 (smart00320), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), UPF0175 (pfam03683)

Seq: JAAHHX010000535.1 Moorea sp. SIO4A1 4A1_NODE_535, whole genome shotgun sequence (1708 bp)
Overview 1 RT 1: 229-1690 bp Neighborhood of RT #1 [229, 1707] DDE_Tnp_ISAZ013 RVT-GII Feature: gene Location: 229-363 bp Feature: gene Location: 613-996 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 643-949 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 643-949 bp Feature: gene Location: 1303-1707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1309-1690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1309-1690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-GII

Seq: JAAHHX010000549.1 Moorea sp. SIO4A1 4A1_NODE_549, whole genome shotgun sequence (1686 bp)
Overview 1 RT 1: 197-1639 bp Neighborhood of RT #1 [197, 1683] InsQ RVT-GII GIIM HNHc Feature: gene Location: 197-784 bp Feature: domain Description: InsQ Location: 209-731 bp Feature: domain Description: InsQ Location: 209-731 bp Feature: gene Location: 904-1683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 910-985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 910-985 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1297 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1297 bp Feature: domain Description: HNHc Note: nucleases Location: 1480-1639 bp Feature: domain Description: HNHc Note: nucleases Location: 1480-1639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHX010000559.1 Moorea sp. SIO4A1 4A1_NODE_559, whole genome shotgun sequence (1670 bp)
Overview 1 RT 1: 110-1565 bp Neighborhood of RT #1 [110, 1669] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 110-1669 bp Feature: domain Description: RVT_N Location: 116-362 bp Feature: domain Description: RVT_N Location: 116-362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1007 bp Feature: domain Description: GIIM Note: maturase Location: 1064-1244 bp Feature: domain Description: GIIM Note: maturase Location: 1064-1244 bp Feature: domain Description: McrA Location: 1280-1565 bp Feature: domain Description: McrA Location: 1280-1565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000570.1 Moorea sp. SIO4A1 4A1_NODE_570, whole genome shotgun sequence (1651 bp)
Overview 1 RT 1: 85-1612 bp Neighborhood of RT #1 [85, 1650] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 85-1650 bp Feature: domain Description: RVT_N Location: 166-412 bp Feature: domain Description: RVT_N Location: 166-412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889-1057 bp Feature: domain Description: GIIM Note: maturase Location: 1114-1279 bp Feature: domain Description: GIIM Note: maturase Location: 1114-1279 bp Feature: domain Description: McrA Location: 1291-1612 bp Feature: domain Description: McrA Location: 1291-1612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000587.1 Moorea sp. SIO4A1 4A1_NODE_587, whole genome shotgun sequence (1624 bp)
Overview 1 RT 1: 57-1615 bp Neighborhood of RT #1 [57, 1623] DDE_Tnp_1 RVT-GII Feature: gene Location: 57-188 bp Feature: gene Location: 191-1327 bp Feature: domain Description: DDE_Tnp_1 Location: 590-1043 bp Feature: domain Description: DDE_Tnp_1 Location: 590-1043 bp Feature: gene Location: 1486-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1489-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1489-1615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII

Seq: JAAHHX010000633.1 Moorea sp. SIO4A1 4A1_NODE_633, whole genome shotgun sequence (1561 bp)
Overview 1 RT 1: 1-1353 bp Neighborhood of RT #1 [1, 1406] RVT-GII GIIM McrA RVT_N Feature: gene Location: 1-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-526 bp Feature: domain Description: GIIM Note: maturase Location: 583-784 bp Feature: domain Description: GIIM Note: maturase Location: 583-784 bp Feature: domain Description: McrA Location: 802-1012 bp Feature: domain Description: McrA Location: 802-1012 bp Feature: gene Location: 1212-1406 bp Feature: domain Description: RVT_N Location: 1236-1353 bp Feature: domain Description: RVT_N Location: 1236-1353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHX010000663.1 Moorea sp. SIO4A1 4A1_NODE_663, whole genome shotgun sequence (1527 bp)
Overview 1 RT 1: 3-1524 bp Neighborhood of RT #1 [3, 1524] RVT-GII GIIM McrA Feature: gene Location: 3-1292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-591 bp Feature: domain Description: GIIM Note: maturase Location: 678-903 bp Feature: domain Description: GIIM Note: maturase Location: 678-903 bp Feature: domain Description: McrA Location: 960-1251 bp Feature: domain Description: McrA Location: 960-1251 bp Feature: gene Location: 1396-1524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000688.1 Moorea sp. SIO4A1 4A1_NODE_688, whole genome shotgun sequence (1492 bp)
Overview 1 RT 1: 3-1434 bp Neighborhood of RT #1 [3, 1445] RVT_N RVT-GII GIIM McrA Feature: gene Location: 3-1445 bp Feature: domain Description: RVT_N Location: 9-228 bp Feature: domain Description: RVT_N Location: 9-228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279-879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279-879 bp Feature: domain Description: GIIM Note: maturase Location: 936-1113 bp Feature: domain Description: GIIM Note: maturase Location: 936-1113 bp Feature: domain Description: McrA Location: 1134-1434 bp Feature: domain Description: McrA Location: 1134-1434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000744.1 Moorea sp. SIO4A1 4A1_NODE_744, whole genome shotgun sequence (1412 bp)
Overview 1 RT 1: 87-984 bp Neighborhood of RT #1 [87, 1028] RVT-GII GIIM McrA Feature: gene Location: 87-1028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-327 bp Feature: domain Description: GIIM Note: maturase Location: 414-639 bp Feature: domain Description: GIIM Note: maturase Location: 414-639 bp Feature: domain Description: McrA Location: 690-984 bp Feature: domain Description: McrA Location: 690-984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000776.1 Moorea sp. SIO4A1 4A1_NODE_776, whole genome shotgun sequence (1351 bp)
Overview 1 RT 1: 2-1310 bp Neighborhood of RT #1 [2, 1348] RVT-GII GIIM McrA Feature: gene Location: 2-178 bp Feature: gene Location: 275-1348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-647 bp Feature: domain Description: GIIM Note: maturase Location: 734-959 bp Feature: domain Description: GIIM Note: maturase Location: 734-959 bp Feature: domain Description: McrA Location: 1007-1310 bp Feature: domain Description: McrA Location: 1007-1310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000008.1 Moorea sp. SIO4A1 4A1_NODE_8, whole genome shotgun sequence (240652 bp)
Overview 1 RT 1: 61746-67545 bp 2 RT 2: 87535-92250 bp Neighborhood of RT #1 [61746, 70136] RVT-Retrons SWIM WGR_DNA_ligase HEAT_2 Neighborhood of RT #2 [87535, 92250] PRK07451 RVT_N RVT-GII GIIM McrA InsQ Feature: gene Location: 61746-62075 bp Feature: gene Location: 62167-62883 bp Feature: gene Location: 63092-64504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63638-64259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63638-64259 bp Feature: gene Location: 64948-66588 bp Feature: domain Description: SWIM Location: 66475-66559 bp Feature: domain Description: SWIM Location: 66475-6655 9 bp Feature: gene Location: 66954-70136 bp Feature: domain Description: WGR_DNA_ligase Location: 66969-67194 bp Feature: domain Description: WGR_DNA_ligase Location: 66969-67194 bp Feature: domain Description: HEAT_2 Location: 67335-67545 bp Feature: domain Description: HEAT_2 Location: 67335-67545 bp Feature: gene Location: 87535-87903 bp Feature: domain Description: PRK07451 Location: 87571-87901 bp Feature: domain Description: PRK07451 Location: 87571-87901 bp Feature: gene Location: 88047-88388 bp Feature: gene Location: 88533-90236 bp Feature: domain Description: RVT_N Location: 88572-88818 bp Feature: domain Description: RVT_N Location: 88572-88818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88860-89511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88860-89511 bp Feature: domain Description: GIIM Note: maturase Location: 89589-89823 bp Feature: domain Description: GIIM Note: maturase Location: 89589-89823 bp Feature: domain Description: McrA Location: 89916-90204 bp Feature: domain Description: McrA Location: 89916-90204 bp Feature: gene Location: 90818-92020 bp Feature: domain Description: InsQ Location: 90833-92006 bp Feature: domain Description: InsQ Location: 90833-92006 bp Feature: gene Location: 92080-92250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, SWIM (pfam04434), WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), PRK07451 (translation initiation factor), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)

Seq: JAAHHX010000083.1 Moorea sp. SIO4A1 4A1_NODE_83, whole genome shotgun sequence (22999 bp)
Overview 1 RT 1: 19631-22884 bp Neighborhood of RT #1 [19631, 22913] excise RVT_N RVT-GII group_II_RT_mat HNHc Feature: gene Location: 19631-20083 bp Feature: domain Description: excise Location: 19652-19757 bp Feature: domain Description: excise Location: 19652-19757 bp Feature: gene Location: 20725-20907 bp Feature: gene Location: 21075-22913 bp Feature: domain Description: RVT_N Location: 21117-21372 bp Feature: domain Description: RVT_N Location: 21117-21372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21414-22092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21414-22092 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 22227-22467 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 22227-22467 bp Feature: domain Description: HNHc Note: nucleases Location: 22725-22884 bp Feature: domain Description: HNHc Note: nucleases Location: 22725-22884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT excise (TIGR01764), RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)

Seq: JAAHHX010000863.1 Moorea sp. SIO4A1 4A1_NODE_863, whole genome shotgun sequence (1232 bp)
Overview 1 RT 1: 1-1230 bp Neighborhood of RT #1 [1, 1229] RVT-GII GIIM McrA COG5635 Feature: gene Location: 1-735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-139 bp Feature: domain Description: GIIM Note: maturase Location: 196-385 bp Feature: domain Description: GIIM Note: maturase Location: 196-385 bp Feature: domain Description: McrA Location: 388-694 bp Feature: domain Description: McrA Location: 388-694 bp Feature: gene Location: 885-1229 bp Feature: domain Description: COG5635 Location: 930-1230 bp Feature: domain Description: COG5635 Location: 930-1230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), COG5635 (Predicted NTPase, NACHT family domain )

Seq: JAAHHX010000888.1 Moorea sp. SIO4A1 4A1_NODE_888, whole genome shotgun sequence (1209 bp)
Overview 1 RT 1: 272-1160 bp Neighborhood of RT #1 [272, 1207] RVT-GII RVT-GII GIIM McrA Feature: gene Location: 272-1207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-605 bp Feature: domain Description: GIIM Note: maturase Location: 662-821 bp Feature: domain Description: GIIM Note: maturase Location: 662-821 bp Feature: domain Description: McrA Location: 866-1160 bp Feature: domain Description: McrA Location: 866-1160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000009.1 Moorea sp. SIO4A1 4A1_NODE_9, whole genome shotgun sequence (267711 bp)
Overview 1 RT 1: 202372-206588 bp Neighborhood of RT #1 [202372, 206608] RVT_N RVT-GII GIIM HNH Dam DpnII Feature: gene Location: 202372-202557 bp Feature: gene Location: 202560-202814 bp Feature: gene Location: 202820-204574 bp Feature: domain Description: RVT_N Location: 202865-203108 bp Feature: domain Description: RVT_N Location: 202865-203108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203153-203852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203153-203852 bp Feature: domain Description: GIIM Note: maturase Location: 203957-204185 bp Feature: domain Description: GIIM Note: maturase Location: 203957-204185 bp Feature: domain Description: HNH Note: nucleases Location: 204401-204536 bp Feature: domain Description: HNH Note: nucleases Location: 204401-204536 bp Feature: gene Location: 204749-205531 bp Feature: domain Description: Dam Location: 204752-205529 bp Feature: domain Description: Dam Location: 204752-205529 bp Feature: gene Location: 205685-206608 bp Feature: domain Description: DpnII Location: 205745-206588 bp Feature: domain Description: DpnII Location: 205745-206588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Dam (pfam05869), DpnII (pfam04556)

Seq: JAAHHX010000090.1 Moorea sp. SIO4A1 4A1_NODE_90, whole genome shotgun sequence (21044 bp)
Overview 1 RT 1: 14346-20773 bp Neighborhood of RT #1 [14346, 20773] KOG2161 InsQ RVT_N RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 14346-15224 bp Feature: domain Description: KOG2161 Location: 14373-15195 bp Feature: domain Description: KOG2161 Location: 14373-15195 bp Feature: gene Location: 15703-16683 bp Feature: domain Description: InsQ Location: 15721-16588 bp Feature: domain Description: InsQ Location: 15721-16588 bp Feature: gene Location: 16800-18497 bp Feature: domain Description: RVT_N Location: 16857-17103 bp Feature: domain Description: RVT_N Location: 16857-17103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17145-17796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17145-17796 bp Feature: domain Description: GIIM Note: maturase Location: 17874-18108 bp Feature: domain Description: GIIM Note: maturase Location: 17874-18108 bp Feature: domain Description: McrA Location: 18165-18459 bp Feature: domain Description: McrA Location: 18165-18459 bp Feature: gene Location: 18823-20334 bp Feature: domain Description: RVT_N Location: 18847-19093 bp Feature: domain Description: RVT_N Location: 18847-19093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19144-19570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19144-19570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19573-19738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19573-19738 bp Feature: domain Description: GIIM Note: maturase Location: 19795-19960 bp Feature: domain Description: GIIM Note: maturase Location: 19795-19960 bp Feature: domain Description: McrA Location: 20011-20296 bp Feature: domain Description: McrA Location: 20011-20296 bp Feature: gene Location: 20609-20773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2161 (KOG2161, Glucosidase I ), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000961.1 Moorea sp. SIO4A1 4A1_NODE_961, whole genome shotgun sequence (1133 bp)
Overview 1 RT 1: 1-1104 bp Neighborhood of RT #1 [1, 1130] Pentapeptide RVT-GII GIIM McrA Feature: gene Location: 1-159 bp Feature: domain Description: Pentapeptide Location: 37-145 bp Feature: domain Description: Pentapeptide Location: 37-145 bp Feature: gene Location: 204-1130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-546 bp Feature: domain Description: GIIM Note: maturase Location: 603-789 bp Feature: domain Description: GIIM Note: maturase Location: 603-789 bp Feature: domain Description: McrA Location: 804-1104 bp Feature: domain Description: McrA Location: 804-1104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pentapeptide (pfam00805), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHX010000974.1 Moorea sp. SIO4A1 4A1_NODE_974, whole genome shotgun sequence (1123 bp)
Overview 1 RT 1: 2-722 bp Neighborhood of RT #1 [2, 793] RVT_N RVT-GII Feature: gene Location: 2-793 bp Feature: domain Description: RVT_N Location: 47-293 bp Feature: domain Description: RVT_N Location: 47-293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII