myRT

myRT report for GCA_010672085.1_ASM1067208v1

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Seq: JAAHHT010000001.1 Okeania sp. SIO3I5 3I5_NODE_1, whole genome shotgun sequence (234604 bp)
Overview 1 RT 1: 226171-231152 bp Neighborhood of RT #1 [226171, 231152] HTH_OrfB_IS605 PLN02619 RVT_N RVT-GII GIIM McrA PLN02619 Feature: gene Location: 226171-226599 bp Feature: domain Description: HTH_OrfB_IS605 Location: 226174-226303 bp Feature: domain Description: HTH_OrfB_IS605 Location: 2261 74-226303 bp Feature: gene Location: 227490-227723 bp Feature: domain Description: PLN02619 Location: 227493-227721 bp Feature: domain Description: PLN0261 9 Location: 227493-227721 bp Feature: gene Location: 227847-229730 bp Feature: domain Description: RVT_N Location: 227970-228204 bp Feature: domain Description: RVT_N Location: 227970-228204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228255-228948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228255-228948 bp Feature: domain Description: GIIM Note: maturase Location: 229020-229254 bp Feature: domain Description: GIIM Note: maturase Location: 229020-229254 bp Feature: domain Description: McrA Location: 229323-229623 bp Feature: domain Description: McrA Location: 229323-229623 bp Feature: gene Location: 230297-230482 bp Feature: domain Description: PLN02619 Location: 230300-230456 bp Feature: domain Description: PLN0261 9 Location: 230300-230456 bp Feature: gene Location: 230994-231152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_OrfB_IS605 (pfam12323), PLN02619 (nucleoside-diphosphate kinase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHT010000100.1 Okeania sp. SIO3I5 3I5_NODE_100, whole genome shotgun sequence (31165 bp)
Overview 1 RT 1: 19054-25622 bp Neighborhood of RT #1 [19054, 25636] UbiE DUF4332 RVT-Retrons Rnc Rnc Feature: gene Location: 19054-19821 bp Feature: domain Description: UbiE Location: 19297-19720 bp Feature: domain Description: UbiE Location: 192 97-1972 0 bp Feature: gene Location: 21177-21647 bp Feature: domain Description: DUF4332 Location: 21216-21561 bp Feature: domain Description: DUF4332 Location: 2 12 16-2 1561 bp Feature: gene Location: 22137-23561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22680-23298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 680-2 32 98 bp Feature: gene Location: 24026-24724 bp Feature: domain Description: Rnc Location: 24047-24713 bp Feature: domain Description: Rnc Location: 2 4047-2 4713 bp Feature: gene Location: 24953-25636 bp Feature: domain Description: Rnc Location: 24974-25622 bp Feature: domain Description: Rnc Location: 2 4974-2 562 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UbiE (COG2226), DUF4332 (pfam14229), RVT-Retrons, Rnc (COG0571)

Seq: JAAHHT010000111.1 Okeania sp. SIO3I5 3I5_NODE_111, whole genome shotgun sequence (28826 bp)
Overview 1 RT 1: 101-3246 bp Neighborhood of RT #1 [101, 3246] RVT_N RVT-GII GIIM McrA Pribosyltran Feature: gene Location: 101-1969 bp Feature: domain Description: RVT_N Location: 218-458 bp Feature: domain Description: RVT_N Location: 218-458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-1202 bp Feature: domain Description: GIIM Note: maturase Location: 1274-1508 bp Feature: domain Description: GIIM Note: maturase Location: 1274-1508 bp Feature: domain Description: McrA Location: 1592-1877 bp Feature: domain Description: McrA Location: 1592-1877 bp Feature: gene Location: 2090-2497 bp Feature: domain Description: Pribosyltran Location: 2093-2438 bp Feature: domain Description: Pribosyltran Location: 2093 -243 8 bp Feature: gene Location: 2890-3246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Pribosyltran (pfam00156)

Seq: JAAHHT010000113.1 Okeania sp. SIO3I5 3I5_NODE_113, whole genome shotgun sequence (28394 bp)
Overview 1 RT 1: 17752-22495 bp Neighborhood of RT #1 [17752, 22495] proA HNH RVT-GII GIIM RVT-GII Feature: gene Location: 17752-19047 bp Feature: domain Description: proA Location: 17773-18997 bp Feature: domain Description: proA Location: 17773-18997 bp Feature: gene Location: 19540-19776 bp Feature: domain Description: HNH Note: nucleases Location: 19546-19639 bp Feature: domain Description: HNH Note: nucleases Location: 1954 6-19639 bp Feature: gene Location: 19808-20512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19817-19988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19817-19988 bp Feature: domain Description: GIIM Note: maturase Location: 20090-20294 bp Feature: domain Description: GIIM Note: maturase Location: 20090-20294 bp Feature: gene Location: 20705-20983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20708-20969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20708-20969 bp Feature: gene Location: 21982-22158 bp Feature: gene Location: 22364-22495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), HNH (pfam01844), RVT-GII, GIIM (pfam08388)

Seq: JAAHHT010000116.1 Okeania sp. SIO3I5 3I5_NODE_116, whole genome shotgun sequence (28067 bp)
Overview 1 RT 1: 6299-13573 bp Neighborhood of RT #1 [6299, 13773] avtA YrrM YrrM RVT_N RVT-GII GIIM McrA GH57N_like_1 Feature: gene Location: 6299-7564 bp Feature: domain Description: avtA Location: 6314-7556 bp Feature: domain Description: avtA Location: 6314-75 5 6 bp Feature: gene Location: 7964-8500 bp Feature: domain Description: YrrM Location: 8087-8201 bp Feature: domain Description: YrrM Location: 8087-8201 bp Feature: domain Description: YrrM Location: 8438-8477 bp Feature: domain Description: YrrM Location: 8438-8477 bp Feature: gene Location: 9073-10941 bp Feature: domain Description: RVT_N Location: 9190-9433 bp Feature: domain Description: RVT_N Location: 9190-9433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9481-10174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9481-10174 bp Feature: domain Description: GIIM Note: maturase Location: 10249-10480 bp Feature: domain Description: GIIM Note: maturase Location: 10249-10480 bp Feature: domain Description: McrA Location: 10558-10852 bp Feature: domain Description: McrA Location: 105 5 8-1085 2 bp Feature: gene Location: 11770-12342 bp Feature: gene Location: 12505-13773 bp Feature: domain Description: GH57N_like_1 Location: 12559-13573 bp Feature: domain Description: GH5 7N_like_1 Location: 125 5 9-135 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT avtA (PRK09440), YrrM (COG4122), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), GH57N_like_1 (cd10798)

Seq: JAAHHT010000125.1 Okeania sp. SIO3I5 3I5_NODE_125, whole genome shotgun sequence (26400 bp)
Overview 1 RT 1: 21855-26307 bp Neighborhood of RT #1 [21855, 26399] dnd_rel_methyl Hit Pentapeptide Pentapeptide Pentapeptide RVT_N RVT-GII GIIM McrA Feature: gene Location: 21855-22706 bp Feature: domain Description: dnd_rel_methyl Location: 21888-22116 bp Feature: domain Description: dnd_rel_methyl Location: 21888-22116 bp Feature: domain Description: Hit Location: 22353-22677 bp Feature: domain Description: Hit Location: 22353-226 77 bp Feature: gene Location: 24036-24590 bp Feature: domain Description: Pentapeptide Location: 24042-24102 bp Feature: domain Description: Pentapeptide Location: 24042-24102 bp Feature: domain Description: Pentapeptide Location: 24162-24222 bp Feature: domain Description: Pentapeptide Location: 2416 2-24222 bp Feature: domain Description: Pentapeptide Location: 24336-24432 bp Feature: domain Description: Pentapeptide Location: 24336 -24432 bp Feature: gene Location: 24663-26399 bp Feature: domain Description: RVT_N Location: 24666-24900 bp Feature: domain Description: RVT_N Location: 246 6 6 -24900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24951-25617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24951-256 17 bp Feature: domain Description: GIIM Note: maturase Location: 25689-25923 bp Feature: domain Description: GIIM Note: maturase Location: 256 89-25923 bp Feature: domain Description: McrA Location: 26004-26307 bp Feature: domain Description: McrA Location: 26 004-26 307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnd_rel_methyl (TIGR04096), Hit (COG0537), Pentapeptide (pfam00805), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHT010000015.1 Okeania sp. SIO3I5 3I5_NODE_15, whole genome shotgun sequence (35994 bp)
Overview 1 RT 1: 90-4424 bp Neighborhood of RT #1 [90, 4435] RVT_N RVT-GII GIIM McrA Ycf19 accC Feature: gene Location: 90-1904 bp Feature: domain Description: RVT_N Location: 258-501 bp Feature: domain Description: RVT_N Location: 258-501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 549-1242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 549-1242 bp Feature: domain Description: GIIM Note: maturase Location: 1314-1548 bp Feature: domain Description: GIIM Note: maturase Location: 1314-1548 bp Feature: domain Description: McrA Location: 1617-1893 bp Feature: domain Description: McrA Location: 1617 -1893 bp Feature: gene Location: 2108-2341 bp Feature: domain Description: Ycf19 Location: 2111-2333 bp Feature: domain Description: Ycf19 Location: 2111-2333 bp Feature: gene Location: 3080-4435 bp Feature: domain Description: accC Location: 3089-4424 bp Feature: domain Description: accC Location: 3089-4424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Ycf19 (COG0762), accC (TIGR00514)

Seq: JAAHHT010000154.1 Okeania sp. SIO3I5 3I5_NODE_154, whole genome shotgun sequence (22889 bp)
Overview 1 RT 1: 20407-22885 bp Neighborhood of RT #1 [20407, 22887] DUF3386 RVT_N RVT-GII Feature: gene Location: 20407-20535 bp Feature: gene Location: 21428-21625 bp Feature: domain Description: DUF3386 Location: 21434-21608 bp Feature: domain Description: DUF338 6 Location: 21434-21608 bp Feature: gene Location: 22210-22887 bp Feature: domain Description: RVT_N Location: 22327-22570 bp Feature: domain Description: RVT_N Location: 22327-22570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22618-22885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22618 -228 8 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3386 (pfam11866), RVT_N (pfam13655), RVT-GII

Seq: JAAHHT010000017.1 Okeania sp. SIO3I5 3I5_NODE_17, whole genome shotgun sequence (200216 bp)
Overview 1 RT 1: 178996-186786 bp Neighborhood of RT #1 [178996, 186821] RVT_N RVT-GII GIIM McrA PRK07364 PRK11360 BaeS Feature: gene Location: 178996-179349 bp Feature: gene Location: 180794-181249 bp Feature: gene Location: 181286-182980 bp Feature: domain Description: RVT_N Location: 181322-181565 bp Feature: domain Description: RVT_N Location: 181322-181565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181610-182279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181610-182279 bp Feature: domain Description: GIIM Note: maturase Location: 182378-182579 bp Feature: domain Description: GIIM Note: maturase Location: 182378-182579 bp Feature: domain Description: McrA Location: 182687-182957 bp Feature: domain Description: McrA Location: 182687-1829 57 bp Feature: gene Location: 183230-184321 bp Feature: domain Description: PRK07364 Location: 183236-184304 bp Feature: domain Description: PRK07364 Location: 183236-184304 bp Feature: gene Location: 184749-186821 bp Feature: domain Description: PRK11360 Location: 185304-185691 bp Feature: domain Description: PRK11360 Location: 185304-18569 1 bp Feature: domain Description: BaeS Location: 185694-186786 bp Feature: domain Description: BaeS Location: 18569 4-186786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK07364 (FAD-dependent hydroxylase), PRK11360 (two-component system sensor histidine kinase AtoS), BaeS (COG0642)

Seq: JAAHHT010000176.1 Okeania sp. SIO3I5 3I5_NODE_176, whole genome shotgun sequence (20457 bp)
Overview 1 RT 1: 1171-12202 bp Neighborhood of RT #1 [1171, 12207] RTPR Hint_2 Hop Hop RTPR Hop Hop Hop RTPR Hop RTPR Hint LAGLIDADG_3 RTPR RVT_N RVT-GII GIIM RTPR Feature: gene Location: 1171-1431 bp Feature: gene Location: 1692-9239 bp Feature: domain Description: RTPR Location: 1695-2172 bp Feature: domain Description: RTPR Location: 1695-2172 bp Feature: domain Description: Hint_2 Location: 2172-2286 bp Feature: domain Description: Hint_2 Location: 2172-2286 bp Feature: domain Description: Hop Location: 2337-2553 bp Feature: domain Description: Hop Location: 2337-2553 bp Feature: domain Description: Hop Location: 2751-2943 bp Feature: domain Description: Hop Location: 2751-2943 bp Feature: domain Description: RTPR Location: 3351-3756 bp Feature: domain Description: RTPR Location: 3351-3756 bp Feature: domain Description: Hop Location: 3915-5013 bp Feature: domain Description: Hop Location: 3915-5013 bp Feature: domain Description: Hop Location: 5139-5295 bp Feature: domain Description: Hop Location: 5139-5295 bp Feature: domain Description: Hop Location: 5697-5823 bp Feature: domain Description: Hop Location: 5697-5823 bp Feature: domain Description: RTPR Location: 6087-6489 bp Feature: domain Description: RTPR Location: 6087-6489 bp Feature: domain Description: Hop Location: 6624-7350 bp Feature: domain Description: Hop Location: 6624-7350 bp Feature: domain Description: RTPR Location: 7620-7959 bp Feature: domain Description: RTPR Location: 7620-7959 bp Feature: domain Description: Hint Location: 7959-8271 bp Feature: domain Description: Hint Location: 7959-8271 bp Feature: domain Description: LAGLIDADG_3 Location: 8517-8673 bp Feature: domain Description: LAGLIDADG_3 Location: 8517-8673 bp Feature: domain Description: RTPR Location: 8910-9141 bp Feature: domain Description: RTPR Location: 8910 -9141 bp Feature: gene Location: 9612-11216 bp Feature: domain Description: RVT_N Location: 9654-9900 bp Feature: domain Description: RVT_N Location: 9654-9900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9942-10614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9942-10 614 bp Feature: domain Description: GIIM Note: maturase Location: 10713-10950 bp Feature: domain Description: GIIM Note: maturase Location: 10 713-10 950 bp Feature: gene Location: 11458-11670 bp Feature: gene Location: 11950-12207 bp Feature: domain Description: RTPR Location: 11980-12202 bp Feature: domain Description: RTPR Location: 11980-12202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RTPR (TIGR02505), Hint_2 (pfam13403), Hop (COG1372), Hint (pfam01079), LAGLIDADG_3 (pfam14528), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHT010000186.1 Okeania sp. SIO3I5 3I5_NODE_186, whole genome shotgun sequence (19245 bp)
Overview 1 RT 1: 3844-13147 bp Neighborhood of RT #1 [3844, 13147] PBP2_GltI_DEBP Pentapeptide RVT_N RVT-GII GIIM McrA Pentapeptide Pentapeptide RVT_N RVT-GII GIIM McrA YjbI KOG0548 Feature: gene Location: 3844-4443 bp Feature: domain Description: PBP2_GltI_DEBP Location: 3850-4405 bp Feature: domain Description: PBP2_GltI_DEBP Location: 3850-4405 bp Feature: gene Location: 5299-5529 bp Feature: domain Description: Pentapeptide Location: 5347-5461 bp Feature: domain Description: Pentapeptide Location: 5347-5461 bp Feature: gene Location: 6103-8013 bp Feature: domain Description: RVT_N Location: 6271-6517 bp Feature: domain Description: RVT_N Location: 6271-6517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6562-7231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6562-7231 bp Feature: domain Description: GIIM Note: maturase Location: 7303-7537 bp Feature: domain Description: GIIM Note: maturase Location: 7303-7537 bp Feature: domain Description: McrA Location: 7606-7906 bp Feature: domain Description: McrA Location: 7606-7906 bp Feature: gene Location: 8101-8553 bp Feature: domain Description: Pentapeptide Location: 8107-8182 bp Feature: domain Description: Pentapeptide Location: 8107-8182 bp Feature: domain Description: Pentapeptide Location: 8293-8407 bp Feature: domain Description: Pentapeptide Location: 8293-8407 bp Feature: gene Location: 8771-8998 bp Feature: gene Location: 9575-11440 bp Feature: domain Description: RVT_N Location: 9692-9935 bp Feature: domain Description: RVT_N Location: 9692-9935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9983-10676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9983-10676 bp Feature: domain Description: GIIM Note: maturase Location: 10748-10982 bp Feature: domain Description: GIIM Note: maturase Location: 10748-10982 bp Feature: domain Description: McrA Location: 11063-11348 bp Feature: domain Description: McrA Location: 11 063-11 348 bp Feature: gene Location: 11459-12106 bp Feature: domain Description: YjbI Location: 11525-11732 bp Feature: domain Description: YjbI Location: 11 525-11 732 bp Feature: domain Description: KOG0548 Location: 11759-11948 bp Feature: domain Description: KOG0548 Location: 11 759-11 948 bp Feature: gene Location: 12704-13147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_GltI_DEBP (cd13688), Pentapeptide (pfam00805), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), YjbI (COG2346), KOG0548 (KOG0548, Molecular co-chaperone STI1 )

Seq: JAAHHT010000195.1 Okeania sp. SIO3I5 3I5_NODE_195, whole genome shotgun sequence (17850 bp)
Overview 1 RT 1: 101-3521 bp Neighborhood of RT #1 [101, 3521] RVT_N RVT-GII GIIM HNHc COG2324 Feature: gene Location: 101-1903 bp Feature: domain Description: RVT_N Location: 218-464 bp Feature: domain Description: RVT_N Location: 218-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-12 02 bp Feature: domain Description: GIIM Note: maturase Location: 1274-1508 bp Feature: domain Description: GIIM Note: maturase Location: 12 74-1508 bp Feature: domain Description: HNHc Note: nucleases Location: 1697-1853 bp Feature: domain Description: HNHc Note: nucleases Location: 1697-1853 bp Feature: gene Location: 2165-3133 bp Feature: domain Description: COG2324 Location: 2198-3005 bp Feature: domain Description: COG2324 Location: 2198-3005 bp Feature: gene Location: 3249-3521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG2324 (Uncharacterized membrane protein )

Seq: JAAHHT010000002.1 Okeania sp. SIO3I5 3I5_NODE_2, whole genome shotgun sequence (68537 bp)
Overview 1 RT 1: 56452-61495 bp Neighborhood of RT #1 [56452, 61495] KOG4178 RVT-GII GIIM McrA RVT_N Feature: gene Location: 56452-57057 bp Feature: gene Location: 57997-58875 bp Feature: domain Description: KOG4178 Location: 58015-58870 bp Feature: domain Description: KOG4178 Location: 58015-58870 bp Feature: gene Location: 59049-60458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59052-59691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59052-59691 bp Feature: domain Description: GIIM Note: maturase Location: 59769-60000 bp Feature: domain Description: GIIM Note: maturase Location: 59769-60000 bp Feature: domain Description: McrA Location: 60066-60366 bp Feature: domain Description: McrA Location: 60066-60366 bp Feature: gene Location: 60484-60912 bp Feature: domain Description: RVT_N Location: 60601-60847 bp Feature: domain Description: RVT_N Location: 60601-60847 bp Feature: gene Location: 61334-61495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4178 (KOG4178, Soluble epoxide hydrolase ), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHT010000204.1 Okeania sp. SIO3I5 3I5_NODE_204, whole genome shotgun sequence (17105 bp)
Overview 1 RT 1: 7599-11584 bp Neighborhood of RT #1 [7599, 11586] InsQ RVT_N RVT-GII RVT-GII GIIM HNH pheS Feature: gene Location: 7599-7802 bp Feature: domain Description: InsQ Location: 7695-7794 bp Feature: domain Description: InsQ Location: 7695-7794 bp Feature: gene Location: 8419-8580 bp Feature: gene Location: 8754-9005 bp Feature: domain Description: RVT_N Location: 8760-8847 bp Feature: domain Description: RVT_N Location: 8760-8847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8892-9000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8892-9000 bp Feature: gene Location: 9237-9380 bp Feature: gene Location: 9407-9787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9416-9587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9416-9587 bp Feature: domain Description: GIIM Note: maturase Location: 9659-9776 bp Feature: domain Description: GIIM Note: maturase Location: 9659-9776 bp Feature: gene Location: 10144-10329 bp Feature: domain Description: HNH Note: nucleases Location: 10150-10243 bp Feature: domain Description: HNH Note: nucleases Location: 10150-10243 bp Feature: gene Location: 10591-11586 bp Feature: domain Description: pheS Location: 10615-11584 bp Feature: domain Description: pheS Location: 10615-11584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), pheS (TIGR00468)

Seq: JAAHHT010000221.1 Okeania sp. SIO3I5 3I5_NODE_221, whole genome shotgun sequence (16198 bp)
Overview 1 RT 1: 10048-14334 bp Neighborhood of RT #1 [10048, 14345] PRK14186 InsQ RVT-GII KOG0776 YuiD Feature: gene Location: 10048-10911 bp Feature: domain Description: PRK14186 Location: 10051-10897 bp Feature: domain Description: PRK14186 Location: 10051-10897 bp Feature: gene Location: 11123-12325 bp Feature: domain Description: InsQ Location: 11126-12230 bp Feature: domain Description: InsQ Location: 11126-12230 bp Feature: gene Location: 12391-12591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12397-12562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12397-12562 bp Feature: gene Location: 12927-13877 bp Feature: domain Description: KOG0776 Location: 12993-13875 bp Feature: domain Description: KOG0776 Location: 12993-13875 bp Feature: gene Location: 13887-14345 bp Feature: domain Description: YuiD Location: 13890-14334 bp Feature: domain Description: YuiD Location: 13890-14334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14186 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD), InsQ (COG0675), RVT-GII, KOG0776 (KOG0776, Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase ), YuiD (COG1963)

Seq: JAAHHT010000250.1 Okeania sp. SIO3I5 3I5_NODE_250, whole genome shotgun sequence (13464 bp)
Overview 1 RT 1: 9224-13440 bp Neighborhood of RT #1 [9224, 13463] PRK12561 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 9224-10906 bp Feature: domain Description: PRK12561 Location: 9305-10883 bp Feature: domain Description: PRK12561 Location: 9305-10883 bp Feature: gene Location: 11044-11178 bp Feature: gene Location: 11658-13463 bp Feature: domain Description: RVT_N Location: 11817-12057 bp Feature: domain Description: RVT_N Location: 11817-12057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12108-12801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12108-12801 bp Feature: domain Description: GIIM Note: maturase Location: 12873-13107 bp Feature: domain Description: GIIM Note: maturase Location: 12873-13107 bp Feature: domain Description: HNHc Note: nucleases Location: 13296-13440 bp Feature: domain Description: HNHc Note: nucleases Location: 13296-13440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12561 (NAD(P)H-quinone oxidoreductase subunit 4; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHT010000028.1 Okeania sp. SIO3I5 3I5_NODE_28, whole genome shotgun sequence (101514 bp)
Overview 1 RT 1: 43615-47446 bp Neighborhood of RT #1 [43615, 47446] PRK00702 RVT_N RVT-GII GIIM McrA RpiA Feature: gene Location: 43615-43971 bp Feature: domain Description: PRK00702 Location: 43642-43951 bp Feature: domain Description: PRK00702 Location: 43642-43951 bp Feature: gene Location: 44662-46401 bp Feature: domain Description: RVT_N Location: 44779-45022 bp Feature: domain Description: RVT_N Location: 44779-45022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45070-45739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45070-45739 bp Feature: domain Description: GIIM Note: maturase Location: 45811-46045 bp Feature: domain Description: GIIM Note: maturase Location: 45811-46045 bp Feature: domain Description: McrA Location: 46114-46390 bp Feature: domain Description: McrA Location: 46114-46390 bp Feature: gene Location: 46649-46969 bp Feature: domain Description: RpiA Location: 46655-46937 bp Feature: domain Description: RpiA Location: 46655-46937 bp Feature: gene Location: 47282-47446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00702 (ribose-5-phosphate isomerase RpiA), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), RpiA (COG0120)

Seq: JAAHHT010000297.1 Okeania sp. SIO3I5 3I5_NODE_297, whole genome shotgun sequence (10476 bp)
Overview 1 RT 1: 6194-10383 bp Neighborhood of RT #1 [6194, 10475] TPR RVT_N RVT-GII GIIM McrA Feature: gene Location: 6194-6412 bp Feature: gene Location: 7145-7567 bp Feature: domain Description: TPR Location: 7190-7412 bp Feature: domain Description: TPR Location: 7190-7412 bp Feature: gene Location: 8580-10475 bp Feature: domain Description: RVT_N Location: 8727-8970 bp Feature: domain Description: RVT_N Location: 8727-8970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9018-9711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9018 -9711 bp Feature: domain Description: GIIM Note: maturase Location: 9786-10017 bp Feature: domain Description: GIIM Note: maturase Location: 9786-10017 bp Feature: domain Description: McrA Location: 10092-10383 bp Feature: domain Description: McrA Location: 10092-10383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHT010000334.1 Okeania sp. SIO3I5 3I5_NODE_334, whole genome shotgun sequence (8094 bp)
Overview 1 RT 1: 5885-7977 bp Neighborhood of RT #1 [5885, 8093] NifU DUF3386 RVT-GII GIIM HNHc Feature: gene Location: 5885-6127 bp Feature: domain Description: NifU Location: 5921-6113 bp Feature: domain Description: NifU Location: 5921-6113 bp Feature: gene Location: 6223-6540 bp Feature: domain Description: DUF3386 Location: 6226-6523 bp Feature: domain Description: DUF3386 Location: 6226-6523 bp Feature: gene Location: 6771-8093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6774-7326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6774-7326 bp Feature: domain Description: GIIM Note: maturase Location: 7398-7632 bp Feature: domain Description: GIIM Note: maturase Location: 7398-7632 bp Feature: domain Description: HNHc Note: nucleases Location: 7821-7977 bp Feature: domain Description: HNHc Note: nucleases Location: 7821-7977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifU (pfam01106), DUF3386 (pfam11866), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHT010000035.1 Okeania sp. SIO3I5 3I5_NODE_35, whole genome shotgun sequence (64099 bp)
Overview 1 RT 1: 50042-56378 bp Neighborhood of RT #1 [50042, 56599] Pentapeptide Pentapeptide Pentapeptide RVT_N RVT-GII GIIM McrA Pentapeptide GAF GAF PAS PAS_4 AcyC Feature: gene Location: 50042-50359 bp Feature: gene Location: 50419-50934 bp Feature: domain Description: Pentapeptide Location: 50422-50533 bp Feature: domain Description: Pentapeptide Location: 50422-50533 bp Feature: domain Description: Pentapeptide Location: 50635-50743 bp Feature: domain Description: Pentapeptide Location: 50635-50743 bp Feature: domain Description: Pentapeptide Location: 50746-50863 bp Feature: domain Description: Pentapeptide Location: 50746-50863 bp Feature: gene Location: 51051-52895 bp Feature: domain Description: RVT_N Location: 51168-51411 bp Feature: domain Description: RVT_N Location: 51168-51411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51459-52128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51459-52128 bp Feature: domain Description: GIIM Note: maturase Location: 52200-52434 bp Feature: domain Description: GIIM Note: maturase Location: 5220 0-52434 bp Feature: domain Description: McrA Location: 52518-52803 bp Feature: domain Description: McrA Location: 52518-52803 bp Feature: gene Location: 53468-53656 bp Feature: domain Description: Pentapeptide Location: 53585-53636 bp Feature: domain Description: Pentapeptide Location: 53585-53636 bp Feature: gene Location: 54008-56599 bp Feature: domain Description: GAF Location: 54203-54644 bp Feature: domain Description: GAF Location: 5420 3-54644 bp Feature: domain Description: GAF Location: 54716-55157 bp Feature: domain Description: GAF Location: 54716-55157 bp Feature: domain Description: PAS Location: 55184-55277 bp Feature: domain Description: PAS Location: 55184-55277 bp Feature: domain Description: PAS_4 Location: 55640-55730 bp Feature: domain Description: PAS_4 Location: 55640-55730 bp Feature: domain Description: AcyC Location: 55751-56378 bp Feature: domain Description: AcyC Location: 55751-56378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pentapeptide (pfam00805), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), GAF (smart00065), PAS (smart00091), PAS_4 (pfam08448), AcyC (COG2114)

Seq: JAAHHT010000038.1 Okeania sp. SIO3I5 3I5_NODE_38, whole genome shotgun sequence (61526 bp)
Overview 1 RT 1: 58473-61439 bp Neighborhood of RT #1 [58473, 61439] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 58473-58634 bp Feature: gene Location: 59139-59360 bp Feature: domain Description: RVT_N Location: 59217-59325 bp Feature: domain Description: RVT_N Location: 5921 7-59325 bp Feature: gene Location: 59708-60625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59717-59864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59717-59864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59873-60038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59873-60038 bp Feature: domain Description: GIIM Note: maturase Location: 60098-60296 bp Feature: domain Description: GIIM Note: maturase Location: 60098-60296 bp Feature: domain Description: McrA Location: 60314-60593 bp Feature: domain Description: McrA Location: 60314-60593 bp Feature: gene Location: 61287-61439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHT010000402.1 Okeania sp. SIO3I5 3I5_NODE_402, whole genome shotgun sequence (4987 bp)
Overview 1 RT 1: 67-4887 bp Neighborhood of RT #1 [67, 4898] RVT_N RVT-GII GIIM McrA RlaP RVT_N RVT-GII GIIM HNHc Feature: gene Location: 67-1932 bp Feature: domain Description: RVT_N Location: 184-427 bp Feature: domain Description: RVT_N Location: 184-427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475-1165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475-1165 bp Feature: domain Description: GIIM Note: maturase Location: 1240-1471 bp Feature: domain Description: GIIM Note: maturase Location: 1240-1471 bp Feature: domain Description: McrA Location: 1516-1840 bp Feature: domain Description: McrA Location: 1516-1840 bp Feature: gene Location: 2286-2555 bp Feature: gene Location: 2636-2860 bp Feature: domain Description: RlaP Location: 2645-2846 bp Feature: domain Description: RlaP Location: 2645-2846 bp Feature: gene Location: 3138-4898 bp Feature: domain Description: RVT_N Location: 3255-3498 bp Feature: domain Description: RVT_N Location: 3255-3498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3546-4236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3546-4236 bp Feature: domain Description: GIIM Note: maturase Location: 4308-4542 bp Feature: domain Description: GIIM Note: maturase Location: 4308-4542 bp Feature: domain Description: HNHc Note: nucleases Location: 4731-4887 bp Feature: domain Description: HNHc Note: nucleases Location: 4731-4887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), RlaP, HNHc (smart00507)

Seq: JAAHHT010000471.1 Okeania sp. SIO3I5 3I5_NODE_471, whole genome shotgun sequence (2650 bp)
Overview 1 RT 1: 2-2453 bp Neighborhood of RT #1 [2, 2530] RVT_N RVT-GII GIIM McrA Feature: gene Location: 2-172 bp Feature: gene Location: 274-456 bp Feature: gene Location: 686-2530 bp Feature: domain Description: RVT_N Location: 803-1046 bp Feature: domain Description: RVT_N Location: 803-1046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094-1763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094-1763 bp Feature: domain Description: GIIM Note: maturase Location: 1835-2069 bp Feature: domain Description: GIIM Note: maturase Location: 1835-2069 bp Feature: domain Description: McrA Location: 2120-2453 bp Feature: domain Description: McrA Location: 2120-2453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHT010000049.1 Okeania sp. SIO3I5 3I5_NODE_49, whole genome shotgun sequence (47721 bp)
Overview 1 RT 1: 28512-32503 bp Neighborhood of RT #1 [28512, 32520] RVT_N RVT-GII GIIM McrA PRK12494 Feature: gene Location: 28512-28658 bp Feature: gene Location: 29195-29326 bp Feature: gene Location: 29556-31424 bp Feature: domain Description: RVT_N Location: 29673-29916 bp Feature: domain Description: RVT_N Location: 29673-29916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29964-30657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29964-30657 bp Feature: domain Description: GIIM Note: maturase Location: 30729-30963 bp Feature: domain Description: GIIM Note: maturase Location: 30729-30963 bp Feature: domain Description: McrA Location: 31047-31332 bp Feature: domain Description: McrA Location: 31047-31332 bp Feature: gene Location: 31595-31822 bp Feature: gene Location: 32005-32520 bp Feature: domain Description: PRK12494 Location: 32014-32503 bp Feature: domain Description: PRK124 94 Location: 32014-32503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK12494 (NAD(P)H-quinone oxidoreductase subunit J)

Seq: JAAHHT010000493.1 Okeania sp. SIO3I5 3I5_NODE_493, whole genome shotgun sequence (1952 bp)
Overview 1 RT 1: 225-1560 bp Neighborhood of RT #1 [225, 1568] HNH GIIM RVT-GII Feature: gene Location: 225-536 bp Feature: domain Description: HNH Note: nucleases Location: 240-342 bp Feature: domain Description: HNH Note: nucleases Location: 240-342 bp Feature: gene Location: 550-1125 bp Feature: domain Description: GIIM Note: maturase Location: 673-907 bp Feature: domain Description: GIIM Note: maturase Location: 673-907 bp Feature: gene Location: 1245-1568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251-1560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125 1-1560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), GIIM (pfam08388), RVT-GII

Seq: JAAHHT010000052.1 Okeania sp. SIO3I5 3I5_NODE_52, whole genome shotgun sequence (46117 bp)
Overview 1 RT 1: 24978-27427 bp 2 RT 2: 33139-42644 bp Neighborhood of RT #1 [24978, 27427] RVT_N RVT-GII YkfC Neighborhood of RT #2 [33139, 42688] PRK07561 RVT_N RVT-GII GIIM McrA YgcG Feature: gene Location: 24978-26318 bp Feature: domain Description: RVT_N Location: 25023-25266 bp Feature: domain Description: RVT_N Location: 25023-2526 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25305-25902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25305-25902 bp Feature: domain Description: YkfC Location: 26109-26232 bp Feature: domain Description: YkfC Location: 26 109-26 232 bp Feature: gene Location: 26924-27109 bp Feature: gene Location: 27167-27427 bp Feature: gene Location: 33139-33318 bp Feature: gene Location: 34820-37444 bp Feature: domain Description: PRK07561 Location: 34826-37433 bp Feature: domain Description: PRK07561 Location: 34826 -37433 bp Feature: gene Location: 37601-39496 bp Feature: domain Description: RVT_N Location: 37769-38012 bp Feature: domain Description: RVT_N Location: 37769-38012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38060-38729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38060-38729 bp Feature: domain Description: GIIM Note: maturase Location: 38801-39035 bp Feature: domain Description: GIIM Note: maturase Location: 38801-39035 bp Feature: domain Description: McrA Location: 39119-39404 bp Feature: domain Description: McrA Location: 39119-39404 bp Feature: gene Location: 40924-41454 bp Feature: gene Location: 41972-42688 bp Feature: domain Description: YgcG Location: 42065-42644 bp Feature: domain Description: YgcG Location: 42065-426 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), PRK07561 (DNA topoisomerase I subunit omega; Validated), GIIM (pfam08388), McrA (COG4058), YgcG (COG1512)

Seq: JAAHHT010000007.1 Okeania sp. SIO3I5 3I5_NODE_7, whole genome shotgun sequence (144958 bp)
Overview 1 RT 1: 40282-46436 bp Neighborhood of RT #1 [40282, 46468] RVT-UG18 Methyltransf_28 PTDH Feature: gene Location: 40282-42024 bp Feature: gene Location: 42417-42725 bp Feature: gene Location: 42752-43042 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 42887-43037 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 42887-43037 bp Feature: gene Location: 43551-45122 bp Feature: domain Description: Methyltransf_28 Location: 43830-44487 bp Feature: domain Description: Methyltransf_28 Location: 43830-44487 bp Feature: gene Location: 45473-46468 bp Feature: domain Description: PTDH Location: 45485-46436 bp Feature: domain Description: PTDH Location: 45485-46436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18, Methyltransf_28 (pfam02636), PTDH (cd12157)

Seq: JAAHHT010000070.1 Okeania sp. SIO3I5 3I5_NODE_70, whole genome shotgun sequence (39490 bp)
Overview 1 RT 1: 3922-7371 bp Neighborhood of RT #1 [3922, 7433] RVT_N RVT-GII GIIM McrA DUF3007 Feature: gene Location: 3922-4137 bp Feature: gene Location: 4113-4382 bp Feature: domain Description: RVT_N Location: 4149-4284 bp Feature: domain Description: RVT_N Location: 4149-428 4 bp Feature: gene Location: 4416-5687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4419-5025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4419-5025 bp Feature: domain Description: GIIM Note: maturase Location: 5097-5331 bp Feature: domain Description: GIIM Note: maturase Location: 5097-5331 bp Feature: domain Description: McrA Location: 5400-5676 bp Feature: domain Description: McrA Location: 5400-5676 bp Feature: gene Location: 5920-6159 bp Feature: gene Location: 7083-7433 bp Feature: domain Description: DUF3007 Location: 7086-7371 bp Feature: domain Description: DUF3007 Location: 7086-7371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF3007 (pfam11460)