myRT

myRT report for GCA_010672145.1_ASM1067214v1

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Seq: JAAHHO010001226.1 Leptolyngbya sp. SIO3F4 3F4_NODE_1226, whole genome shotgun sequence (1961 bp)
Overview 1 RT 1: 109-1869 bp Neighborhood of RT #1 [109, 1869] RVT-GII GIIM Feature: gene Location: 109-1446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388-1009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388-1 009 bp Feature: domain Description: GIIM Note: maturase Location: 1054-1258 bp Feature: domain Description: GIIM Note: maturase Location: 1 054-1 258 bp Feature: gene Location: 1498-1869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHO010000069.1 Leptolyngbya sp. SIO3F4 3F4_NODE_69, whole genome shotgun sequence (14633 bp)
Overview 1 RT 1: 1-3882 bp Neighborhood of RT #1 [1, 3944] RVT-CRISPR Cas_Cas1 HTH_XRE AAA_22 Csx1_III-U Feature: gene Location: 1-1506 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 190-799 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 190-799 bp Feature: domain Description: Cas_Cas1 Location: 979-1504 bp Feature: domain Description: Cas_Cas1 Location: 979-1504 bp Feature: gene Location: 1662-3065 bp Feature: domain Description: HTH_XRE Location: 1737-1869 bp Feature: domain Description: HTH_XRE Location: 1737-1869 bp Feature: domain Description: AAA_22 Location: 2007-2307 bp Feature: domain Description: AAA_2 2 Location: 2 007-2 307 bp Feature: gene Location: 3081-3944 bp Feature: domain Description: Csx1_III-U Location: 3693-3882 bp Feature: domain Description: Csx1_III-U Location: 3693-3882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867), HTH_XRE (smart00530), AAA_22 (pfam13401), Csx1_III-U (cl21570)